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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01243 and MPMX19_01244 are separated by 21 nucleotides
MPMX19_01244 and MPMX19_01245 are separated by 42 nucleotides
MPMX19_01245 and MPMX19_01246 overlap by 4 nucleotides
MPMX19_01246 and MPMX19_01247 are separated by 147 nucleotides
MPMX19_01243: MPMX19_01243 - hypothetical protein, at 1,293,352 to 1,293,864
_01243
MPMX19_01244: MPMX19_01244 - hypothetical protein, at 1,293,886 to 1,294,176
_01244
MPMX19_01245: MPMX19_01245 - Transcriptional regulatory protein OmpR, at 1,294,219 to 1,295,046
_01245
MPMX19_01246: MPMX19_01246 - Adaptive-response sensory-kinase SasA, at 1,295,043 to 1,296,455
_01246
MPMX19_01247: MPMX19_01247 - Transcriptional regulatory protein DegU, at 1,296,603 to 1,297,292
_01247
Group
Condition
MPMX19
_01243
MPMX19
_01244
MPMX19
_01245
MPMX19
_01246
MPMX19
_01247
nln
NLN
-1.6
-0.7
-0.1
N.D.
-0.8
mgl
MGL
-2.6
-0.3
+0.2
N.D.
-0.3
mgl
MGL
-1.2
-0.0
+0.0
N.D.
-1.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.8
+0.5
-0.1
N.D.
-1.2
nl-ccm_agar
NL-CCM_agar
-1.8
+0.0
-0.1
N.D.
-0.6
nl-ccm
NL-CCM, start OD=0.1
-0.6
-0.3
+0.2
N.D.
-1.6
mgl
MGL
-0.9
+0.7
+0.2
N.D.
-2.1
nl-ccm
NL-CCM, start OD=0.1
-1.4
-0.1
+0.2
N.D.
-0.7
mgl
MGL
-1.3
+0.5
+0.2
N.D.
-1.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.8
-0.5
+0.1
N.D.
-0.4
nl-ccm
NL-CCM, start OD=0.3
-1.6
+0.3
+0.2
N.D.
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.3
+0.1
N.D.
-1.1
nf
NF
-1.3
+0.4
+0.1
N.D.
-0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.7
-0.1
N.D.
-0.9
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.3
+0.3
+0.3
N.D.
-0.6
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.3
+0.4
-0.0
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.7
+0.3
+0.1
N.D.
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.0
-0.2
+0.2
N.D.
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
+0.2
-0.0
N.D.
-0.7
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.7
+0.2
+0.1
N.D.
-0.9
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.2
-0.2
N.D.
-1.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
+0.4
-0.1
N.D.
-1.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.7
+0.4
-0.3
N.D.
-0.6
mgl
MGL
-0.3
-0.9
-0.2
N.D.
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
-0.7
-0.4
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
+0.5
+0.1
N.D.
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.7
-0.0
-0.0
N.D.
-0.8
nl-ccm
NL-CCM, start OD=0.3
+0.9
-0.1
+0.2
N.D.
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
+0.9
-0.8
-0.4
N.D.
+0.8
nf_with_fulln
NF_with_fullN
+1.4
-0.2
+0.0
N.D.
+0.4
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