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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01189 and MPMX19_01190 are separated by 10 nucleotides
MPMX19_01190 and MPMX19_01191 overlap by 8 nucleotides
MPMX19_01191 and MPMX19_01192 are separated by 194 nucleotides
MPMX19_01192 and MPMX19_01193 are separated by 159 nucleotides
MPMX19_01189: MPMX19_01189 - hypothetical protein, at 1,236,722 to 1,237,654
_01189
MPMX19_01190: MPMX19_01190 - Response regulator receiver protein CpdR, at 1,237,665 to 1,238,045
_01190
MPMX19_01191: MPMX19_01191 - Sensor histidine kinase RcsC, at 1,238,038 to 1,239,609
_01191
MPMX19_01192: MPMX19_01192 - Peptide chain release factor 3, at 1,239,804 to 1,241,411
_01192
MPMX19_01193: MPMX19_01193 - Aspartate-semialdehyde dehydrogenase, at 1,241,571 to 1,242,611
_01193
Group
Condition
MPMX19
_01189
MPMX19
_01190
MPMX19
_01191
MPMX19
_01192
MPMX19
_01193
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.1
-0.2
N.D.
N.D.
mgl
MGL
+0.1
-1.0
-0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.8
-0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.1
-0.2
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.3
-0.5
-0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.2
+0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.9
+0.1
+0.1
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.3
+0.0
-0.3
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.5
+0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
-0.1
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.6
-0.0
N.D.
N.D.
nln
NLN
-0.1
-0.4
+0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.4
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
+0.0
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.4
+0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.3
+0.1
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.2
+0.2
N.D.
N.D.
mgl
MGL
-0.2
+0.2
+0.0
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.2
+0.1
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.2
+0.4
-0.1
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.2
-0.1
+0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.4
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.1
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.2
+0.1
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.4
+0.1
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.4
+0.0
N.D.
N.D.
mgl
MGL
-0.0
+0.4
+0.1
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.3
+0.3
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.7
-0.1
N.D.
N.D.
mgl
MGL
+0.0
+0.7
+0.0
N.D.
N.D.
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