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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01144 and MPMX19_01145 are separated by 40 nucleotides
MPMX19_01145 and MPMX19_01146 overlap by 25 nucleotides
MPMX19_01146 and MPMX19_01147 are separated by 433 nucleotides
MPMX19_01147 and MPMX19_01148 are separated by 70 nucleotides
MPMX19_01144: MPMX19_01144 - putative Nudix hydrolase NudL, at 1,179,759 to 1,180,478
_01144
MPMX19_01145: MPMX19_01145 - CCA-adding enzyme, at 1,180,519 to 1,181,811
_01145
MPMX19_01146: MPMX19_01146 - hypothetical protein, at 1,181,787 to 1,182,998
_01146
MPMX19_01147: MPMX19_01147 - A-factor type gamma-butyrolactone 1'-reductase (1S-forming), at 1,183,432 to 1,184,196
_01147
MPMX19_01148: MPMX19_01148 - Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 1,184,267 to 1,185,835
_01148
Group
Condition
MPMX19
_01144
MPMX19
_01145
MPMX19
_01146
MPMX19
_01147
MPMX19
_01148
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
N.D.
-0.1
+0.0
-0.6
mgl
MGL
-0.3
N.D.
+0.1
+0.1
-0.9
mgl
MGL
-0.1
N.D.
-0.2
-0.2
-0.4
mgl
MGL
-0.3
N.D.
+0.1
-0.0
-0.5
mgl
MGL
+0.2
N.D.
+0.1
-0.1
-0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
N.D.
+0.0
-0.0
-0.7
nl-ccm_agar
NL-CCM_agar
+0.0
N.D.
+0.1
-0.2
-0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
N.D.
+0.0
-0.2
-0.3
nl-ccm_agar
NL-CCM_agar
+0.0
N.D.
+0.1
-0.3
-0.3
mgl
MGL
+0.0
N.D.
+0.3
-0.1
-0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
N.D.
+0.0
-0.1
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
N.D.
+0.1
-0.1
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
N.D.
-0.0
-0.3
-0.4
mgl
MGL
+0.2
N.D.
+0.3
-0.3
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
N.D.
+0.1
-0.0
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
N.D.
+0.1
-0.1
-0.4
nln
NLN
+0.2
N.D.
-0.2
-0.0
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
+0.0
+0.1
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
N.D.
+0.2
-0.2
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
N.D.
+0.1
-0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
N.D.
+0.0
+0.3
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
N.D.
-0.0
+0.1
-0.3
nl-ccm_agar
NL-CCM_agar
+0.0
N.D.
+0.2
+0.1
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
N.D.
+0.2
-0.1
-0.3
nln
NLN
+0.2
N.D.
+0.1
+0.2
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
N.D.
+0.2
+0.0
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
N.D.
+0.2
+0.2
-0.2
nf_with_fulln
NF_with_fullN
-0.2
N.D.
+0.1
+0.1
+0.3
nl-ccm_agar
NL-CCM_agar
+0.1
N.D.
+0.2
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
N.D.
-0.2
+0.3
+0.3
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