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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01133 and MPMX19_01134 are separated by 130 nucleotides
MPMX19_01134 and MPMX19_01135 are separated by 9 nucleotides
MPMX19_01135 and MPMX19_01136 are separated by 99 nucleotides
MPMX19_01136 and MPMX19_01137 are separated by 235 nucleotides
MPMX19_01133: MPMX19_01133 - HTH-type transcriptional regulator PgrR, at 1,166,385 to 1,167,287
_01133
MPMX19_01134: MPMX19_01134 - Inner membrane transport protein YdhP, at 1,167,418 to 1,168,611
_01134
MPMX19_01135: MPMX19_01135 - putative methyltransferase YcgJ, at 1,168,621 to 1,169,385
_01135
MPMX19_01136: MPMX19_01136 - hypothetical protein, at 1,169,485 to 1,170,336
_01136
MPMX19_01137: MPMX19_01137 - hypothetical protein, at 1,170,572 to 1,171,753
_01137
Group
Condition
MPMX19
_01133
MPMX19
_01134
MPMX19
_01135
MPMX19
_01136
MPMX19
_01137
mgl
MGL
-0.6
+0.1
-0.5
-0.2
-0.0
mgl
MGL
-0.5
-0.5
-0.1
+0.1
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.6
-0.2
-0.2
+0.0
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.3
-0.3
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.3
-0.1
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.3
-0.2
-0.1
+0.0
mgl
MGL
+0.0
-0.5
-0.1
-0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.1
-0.2
+0.1
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
-0.1
-0.1
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.7
-0.0
+0.1
+0.1
-0.0
nl-ccm_agar
NL-CCM_agar
-0.2
-0.2
-0.2
+0.1
+0.1
mgl
MGL
-0.0
-0.2
-0.4
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.2
-0.0
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.0
-0.3
+0.0
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.2
-0.2
+0.2
-0.0
nln
NLN
-0.3
-0.0
-0.2
+0.1
+0.0
mgl
MGL
-0.4
-0.2
+0.1
-0.0
+0.1
nf
NF
-0.2
-0.1
+0.2
-0.2
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
-0.3
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.2
-0.1
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.2
-0.2
+0.3
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
-0.2
+0.0
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.1
-0.3
+0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.2
-0.2
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
+0.1
-0.1
-0.2
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.2
+0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.1
-0.4
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.1
+0.3
-0.2
+0.6
mgl
MGL
+0.2
+0.1
-0.2
+0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.2
+0.4
-0.1
+0.6
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