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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01115 and MPMX19_01116 are separated by 61 nucleotides
MPMX19_01116 and MPMX19_01117 are separated by 91 nucleotides
MPMX19_01117 and MPMX19_01118 are separated by 164 nucleotides
MPMX19_01118 and MPMX19_01119 are separated by 132 nucleotides
MPMX19_01115: MPMX19_01115 - Phosphoglycolate phosphatase, at 1,151,409 to 1,152,137
_01115
MPMX19_01116: MPMX19_01116 - RNA-binding protein Hfq, at 1,152,199 to 1,152,447
_01116
MPMX19_01117: MPMX19_01117 - GTPase HflX, at 1,152,539 to 1,153,780
_01117
MPMX19_01118: MPMX19_01118 - hypothetical protein, at 1,153,945 to 1,154,253
_01118
MPMX19_01119: MPMX19_01119 - hypothetical protein, at 1,154,386 to 1,154,982
_01119
Group
Condition
MPMX19
_01115
MPMX19
_01116
MPMX19
_01117
MPMX19
_01118
MPMX19
_01119
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
-0.0
+0.1
-1.7
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
-0.6
-0.3
-1.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
N.D.
-0.2
-0.2
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
N.D.
-0.7
-0.5
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
N.D.
-0.3
-0.4
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
N.D.
-0.6
+0.2
-0.4
nf_with_fulln
NF_with_fullN
+0.1
N.D.
-0.5
-0.2
-0.4
mgl
MGL
-0.4
N.D.
-0.4
-0.4
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
-0.1
-0.3
-0.3
mgl
MGL
-0.5
N.D.
+0.1
-0.3
-0.3
mgl
MGL
-0.7
N.D.
+0.4
-0.5
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
-1.2
-0.1
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
N.D.
+0.3
-0.3
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
N.D.
-0.7
-0.3
+0.5
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
+0.2
-0.4
-0.3
mgl
MGL
-0.5
N.D.
-0.7
+0.2
+0.5
nf
NF
-0.1
N.D.
+0.2
-0.5
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
N.D.
-0.0
-0.5
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
N.D.
-0.3
-0.5
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.1
-0.4
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
N.D.
-0.4
+0.1
+0.4
nf_with_fulln
NF_with_fullN
-0.3
N.D.
+0.5
+0.2
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
-0.5
+0.2
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
N.D.
-0.5
-0.0
+0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
N.D.
-0.1
-0.3
+0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
+0.5
-0.5
+0.2
nln
NLN
-0.1
N.D.
-0.2
+0.1
+0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
+0.3
-0.3
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
N.D.
-0.0
+0.1
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
-0.0
+0.2
+0.7
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