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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01110 and MPMX19_01111 overlap by 1 nucleotides
MPMX19_01111 and MPMX19_01112 overlap by 1 nucleotides
MPMX19_01112 and MPMX19_01113 are separated by 236 nucleotides
MPMX19_01113 and MPMX19_01114 overlap by 11 nucleotides
MPMX19_01110: MPMX19_01110 - tRNA-dihydrouridine synthase B, at 1,143,725 to 1,144,711
_01110
MPMX19_01111: MPMX19_01111 - Sensory histidine kinase/phosphatase NtrB, at 1,144,711 to 1,145,925
_01111
MPMX19_01112: MPMX19_01112 - DNA-binding transcriptional regulator NtrC, at 1,145,925 to 1,147,370
_01112
MPMX19_01113: MPMX19_01113 - Adaptive-response sensory-kinase SasA, at 1,147,607 to 1,149,925
_01113
MPMX19_01114: MPMX19_01114 - Regulatory protein AtoC, at 1,149,915 to 1,151,315
_01114
Group
Condition
MPMX19
_01110
MPMX19
_01111
MPMX19
_01112
MPMX19
_01113
MPMX19
_01114
nl-ccm
NL-CCM, start OD=0.3
-0.1
-1.6
N.D.
-1.4
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.9
N.D.
-1.8
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.0
-1.2
N.D.
-1.5
N.D.
nf
NF
-0.2
-1.5
N.D.
-0.9
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-1.7
N.D.
-0.9
N.D.
nl-ccm_agar
NL-CCM_agar
-0.0
-1.4
N.D.
-1.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
-1.1
N.D.
-1.4
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.1
-1.3
N.D.
-0.9
N.D.
nl-ccm_agar
NL-CCM_agar
+0.2
-0.8
N.D.
-1.5
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-1.4
N.D.
-0.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.3
N.D.
-1.9
N.D.
mgl
MGL
-0.3
-1.0
N.D.
-0.8
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.6
N.D.
-1.5
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
-1.9
N.D.
-0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.4
N.D.
-1.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-1.4
N.D.
-0.7
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.6
N.D.
-1.3
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.2
N.D.
-1.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.6
N.D.
-1.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.5
N.D.
-1.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-1.3
N.D.
+2.8
N.D.
nf_with_fulln
NF_with_fullN
-0.2
+0.1
N.D.
+1.9
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.0
N.D.
+1.7
N.D.
nf_with_fulln
NF_with_fullN
+0.1
+0.1
N.D.
+1.7
N.D.
nf_with_fulln
NF_with_fullN
+0.0
+0.2
N.D.
+1.9
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.3
N.D.
+2.8
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.3
N.D.
+2.8
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.6
N.D.
+1.8
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.1
N.D.
+2.6
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.5
N.D.
+2.8
N.D.
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