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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01055 and MPMX19_01056 are separated by 173 nucleotides
MPMX19_01056 and MPMX19_01057 are separated by 3 nucleotides
MPMX19_01057 and MPMX19_01058 overlap by 4 nucleotides
MPMX19_01058 and MPMX19_01059 are separated by 218 nucleotides
MPMX19_01055: MPMX19_01055 - Glycine cleavage system transcriptional activator, at 1,096,081 to 1,096,968
_01055
MPMX19_01056: MPMX19_01056 - hypothetical protein, at 1,097,142 to 1,097,393
_01056
MPMX19_01057: MPMX19_01057 - hypothetical protein, at 1,097,397 to 1,097,846
_01057
MPMX19_01058: MPMX19_01058 - hypothetical protein, at 1,097,843 to 1,098,256
_01058
MPMX19_01059: MPMX19_01059 - hypothetical protein, at 1,098,475 to 1,098,822
_01059
Group
Condition
MPMX19
_01055
MPMX19
_01056
MPMX19
_01057
MPMX19
_01058
MPMX19
_01059
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.0
-0.1
-0.1
-1.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.0
+0.0
-0.2
-1.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.0
-0.0
-0.2
-1.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
-0.0
-0.1
-1.1
nf_with_fulln
NF_with_fullN
-0.1
-0.1
-0.0
-0.1
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
+0.0
-0.1
-0.8
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.5
-0.1
+0.2
-1.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.2
-0.0
+0.0
-1.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
-0.0
-0.0
+0.1
-1.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.3
-0.0
-0.1
-0.8
nf_with_fulln
NF_with_fullN
-0.1
+0.3
+0.1
-0.1
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
-0.2
+0.2
-0.6
nf_with_fulln
NF_with_fullN
+0.1
+0.4
+0.0
-0.2
-0.9
nf_with_fulln
NF_with_fullN
-0.1
+0.5
+0.1
-0.2
-0.9
mgl
MGL
+0.1
+0.3
+0.1
+0.1
-0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.4
+0.1
-0.0
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.2
-0.0
-0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.0
+0.0
+0.2
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
-0.0
-0.1
+0.9
mgl
MGL
-0.1
-0.2
+0.2
-0.2
+1.1
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.1
+0.0
-0.1
+0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.2
+0.1
-0.1
+0.8
mgl
MGL
-0.1
+0.2
-0.0
+0.0
+0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.0
-0.0
-0.0
+1.0
nf
NF
+0.1
+0.1
-0.0
+0.2
+0.6
nl-ccm_agar
NL-CCM_agar
+0.1
+0.2
+0.0
-0.0
+0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.3
+0.0
+0.0
+0.7
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.2
-0.0
+0.0
+0.9
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.2
+0.0
-0.0
+1.2
nf
NF
+0.2
+0.0
-0.0
+0.0
+1.2
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