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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01036 and MPMX19_01037 are separated by 25 nucleotides
MPMX19_01037 and MPMX19_01038 are separated by 385 nucleotides
MPMX19_01038 and MPMX19_01039 are separated by 95 nucleotides
MPMX19_01039 and MPMX19_01040 are separated by 31 nucleotides
MPMX19_01036: MPMX19_01036 - hypothetical protein, at 1,075,917 to 1,076,303
_01036
MPMX19_01037: MPMX19_01037 - Diguanylate cyclase DgcP, at 1,076,329 to 1,077,345
_01037
MPMX19_01038: MPMX19_01038 - UvrABC system protein B, at 1,077,731 to 1,079,872
_01038
MPMX19_01039: MPMX19_01039 - Membrane-bound lytic murein transglycosylase F, at 1,079,968 to 1,080,867
_01039
MPMX19_01040: MPMX19_01040 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,080,899 to 1,081,762
_01040
Group
Condition
MPMX19
_01036
MPMX19
_01037
MPMX19
_01038
MPMX19
_01039
MPMX19
_01040
nf_with_fulln
NF_with_fullN
+0.0
-0.3
-0.3
-0.2
-0.2
nf_with_fulln
NF_with_fullN
+0.1
-0.2
-0.4
-0.2
-0.2
mgl
MGL
-0.3
+0.2
-0.4
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.1
-0.1
+0.0
-0.2
nf_with_fulln
NF_with_fullN
-0.0
-0.2
-0.3
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.0
-0.3
-0.3
-0.1
-0.1
nln
NLN
-0.0
-0.3
-0.2
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.3
-0.1
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.4
-0.0
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.2
-0.1
-0.0
-0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.1
-0.4
-0.0
-0.0
nln
NLN
+0.1
-0.0
-0.2
-0.1
-0.3
nf_with_fulln
NF_with_fullN
+0.2
-0.1
-0.3
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.1
+0.0
-0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.2
-0.1
+0.0
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.0
-0.0
+0.0
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.1
+0.1
+0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.2
-0.0
-0.1
-0.3
mgl
MGL
+0.0
-0.2
-0.3
+0.0
+0.2
mgl
MGL
-0.2
+0.1
-0.6
+0.2
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.2
-0.0
+0.0
-0.2
mgl
MGL
+0.2
-0.3
-0.4
-0.2
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
+0.1
-0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.0
-0.1
+0.2
nf
NF
+0.1
+0.2
+0.0
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.4
-0.2
-0.0
+0.0
mgl
MGL
+0.3
+0.2
-0.2
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.5
-0.0
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.4
+0.2
-0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.6
-0.0
+0.0
+0.0
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