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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01029 and MPMX19_01030 are separated by 52 nucleotides
MPMX19_01030 and MPMX19_01031 are separated by 1 nucleotides
MPMX19_01031 and MPMX19_01032 overlap by 4 nucleotides
MPMX19_01032 and MPMX19_01033 are separated by 64 nucleotides
MPMX19_01029: MPMX19_01029 - Aminomethyltransferase, at 1,067,058 to 1,068,170
_01029
MPMX19_01030: MPMX19_01030 - Glycine cleavage system H protein, at 1,068,223 to 1,068,597
_01030
MPMX19_01031: MPMX19_01031 - putative glycine dehydrogenase (decarboxylating) subunit 1, at 1,068,599 to 1,069,942
_01031
MPMX19_01032: MPMX19_01032 - putative glycine dehydrogenase (decarboxylating) subunit 2, at 1,069,939 to 1,071,510
_01032
MPMX19_01033: MPMX19_01033 - hypothetical protein, at 1,071,575 to 1,071,790
_01033
Group
Condition
MPMX19
_01029
MPMX19
_01030
MPMX19
_01031
MPMX19
_01032
MPMX19
_01033
nln
NLN
-0.3
-0.4
-0.3
-0.3
N.D.
nln
NLN
-0.2
-0.4
-0.3
-0.3
N.D.
nln
NLN
-0.2
-0.4
-0.4
-0.3
N.D.
nln
NLN
-0.4
-0.1
-0.4
-0.2
N.D.
nln
NLN
-0.1
-0.4
-0.2
-0.3
N.D.
nln
NLN
-0.1
-0.2
-0.2
-0.2
N.D.
nf
NF
-0.1
-0.1
-0.1
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.4
-0.0
-0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.1
-0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.2
-0.1
-0.2
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.0
-0.1
-0.1
N.D.
mgl
MGL
+0.2
-0.2
-0.2
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.1
-0.2
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.1
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
+0.0
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.1
+0.0
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.1
+0.1
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.0
-0.1
+0.2
N.D.
mgl
MGL
+0.3
+0.1
-0.1
-0.0
N.D.
nf_with_fulln
NF_with_fullN
-0.0
+0.3
-0.1
-0.0
N.D.
mgl
MGL
+0.3
+0.3
-0.2
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.3
+0.0
-0.0
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.3
+0.0
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.0
+0.1
N.D.
mgl
MGL
+0.1
+0.3
+0.0
-0.1
N.D.
nln
NLN
+0.1
+0.2
+0.1
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.3
-0.1
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.0
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.5
-0.1
+0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.5
-0.2
+0.3
N.D.
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