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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01021 and MPMX19_01022 are separated by 182 nucleotides
MPMX19_01022 and MPMX19_01023 overlap by 4 nucleotides
MPMX19_01023 and MPMX19_01024 overlap by 4 nucleotides
MPMX19_01024 and MPMX19_01025 are separated by 4 nucleotides
MPMX19_01021: MPMX19_01021 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,059,757 to 1,060,596
_01021
MPMX19_01022: MPMX19_01022 - hypothetical protein, at 1,060,779 to 1,061,240
_01022
MPMX19_01023: MPMX19_01023 - Bifunctional adenosylcobalamin biosynthesis protein CobP, at 1,061,237 to 1,061,776
_01023
MPMX19_01024: MPMX19_01024 - Corrinoid adenosyltransferase, at 1,061,773 to 1,062,396
_01024
MPMX19_01025: MPMX19_01025 - Cobyric acid synthase, at 1,062,401 to 1,063,879
_01025
Group
Condition
MPMX19
_01021
MPMX19
_01022
MPMX19
_01023
MPMX19
_01024
MPMX19
_01025
nln
NLN
-0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
-0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.3
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
-0.3
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
N.D.
N.D.
N.D.
nf
NF
-0.1
+0.1
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.1
-0.1
N.D.
N.D.
N.D.
nln
NLN
-0.1
+0.2
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.2
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
+0.3
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.0
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.0
+0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
N.D.
N.D.
N.D.
mgl
MGL
-0.0
+0.3
N.D.
N.D.
N.D.
nln
NLN
+0.1
+0.2
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.2
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.2
+0.1
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
+0.3
N.D.
N.D.
N.D.
nln
NLN
+0.1
+0.2
N.D.
N.D.
N.D.
mgl
MGL
+0.2
+0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.3
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.0
+0.4
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.4
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
N.D.
N.D.
N.D.
mgl
MGL
+0.0
+0.5
N.D.
N.D.
N.D.
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