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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01001 and MPMX19_01002 overlap by 4 nucleotides
MPMX19_01002 and MPMX19_01003 overlap by 4 nucleotides
MPMX19_01003 and MPMX19_01004 are separated by 12 nucleotides
MPMX19_01004 and MPMX19_01005 are separated by 100 nucleotides
MPMX19_01001: MPMX19_01001 - UDP-2,3-diacylglucosamine pyrophosphatase LpxI, at 1,042,253 to 1,043,110
_01001
MPMX19_01002: MPMX19_01002 - Lipid-A-disaccharide synthase, at 1,043,107 to 1,044,339
_01002
MPMX19_01003: MPMX19_01003 - Lactoylglutathione lyase, at 1,044,336 to 1,044,731
_01003
MPMX19_01004: MPMX19_01004 - HTH-type transcriptional regulator CdhR, at 1,044,744 to 1,045,778
_01004
MPMX19_01005: MPMX19_01005 - hypothetical protein, at 1,045,879 to 1,046,277
_01005
Group
Condition
MPMX19
_01001
MPMX19
_01002
MPMX19
_01003
MPMX19
_01004
MPMX19
_01005
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
-0.4
+0.1
-0.6
mgl
MGL
N.D.
N.D.
+0.1
-0.7
-0.3
mgl
MGL
N.D.
N.D.
-0.4
-0.0
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.1
-0.1
-0.4
mgl
MGL
N.D.
N.D.
-0.6
-0.3
+0.5
nf
NF
N.D.
N.D.
-0.0
+0.1
-0.4
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.0
-0.4
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
+0.2
-0.4
nf
NF
N.D.
N.D.
-0.2
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
-0.2
+0.2
mgl
MGL
N.D.
N.D.
-0.2
+0.4
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.2
-0.1
+0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.3
+0.0
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.3
+0.3
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.3
-0.0
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.4
-0.5
+0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.1
-0.2
+0.2
mgl
MGL
N.D.
N.D.
-0.2
-0.3
+0.6
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.4
+0.0
+0.5
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.2
-0.2
+0.6
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.1
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.6
-0.2
-0.1
nln
NLN
N.D.
N.D.
-0.1
+0.0
+0.4
mgl
MGL
N.D.
N.D.
+0.3
-0.0
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.0
+0.1
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.1
+0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
+0.2
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
+0.1
+0.6
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.1
+0.3
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.6
-0.3
+0.6
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