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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00972 and MPMX19_00973 are separated by 134 nucleotides
MPMX19_00973 and MPMX19_00974 are separated by 6 nucleotides
MPMX19_00974 and MPMX19_00975 are separated by 16 nucleotides
MPMX19_00975 and MPMX19_00976 are separated by 257 nucleotides
MPMX19_00972: MPMX19_00972 - DNA topoisomerase 4 subunit B, at 1,011,372 to 1,013,360
_00972
MPMX19_00973: MPMX19_00973 - hypothetical protein, at 1,013,495 to 1,014,049
_00973
MPMX19_00974: MPMX19_00974 - Putative aminoacrylate hydrolase RutD, at 1,014,056 to 1,014,802
_00974
MPMX19_00975: MPMX19_00975 - hypothetical protein, at 1,014,819 to 1,015,364
_00975
MPMX19_00976: MPMX19_00976 - ATP-dependent RNA helicase RhlE, at 1,015,622 to 1,017,205
_00976
Group
Condition
MPMX19
_00972
MPMX19
_00973
MPMX19
_00974
MPMX19
_00975
MPMX19
_00976
mgl
MGL
N.D.
-0.2
-0.3
-0.7
-2.3
nl-ccm_agar
NL-CCM_agar
N.D.
-0.1
-0.1
-0.3
-2.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.0
-0.0
-0.4
-2.0
mgl
MGL
N.D.
-0.7
+0.1
-0.1
-1.3
mgl
MGL
N.D.
+0.2
-0.3
-0.6
-1.3
nl-ccm_agar
NL-CCM_agar
N.D.
-0.1
-0.1
-0.2
-1.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.0
-0.3
-0.2
-1.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.4
-0.2
+0.1
-1.2
nl-ccm_agar
NL-CCM_agar
N.D.
-0.2
-0.1
-0.1
-1.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.2
-0.1
+0.1
-1.5
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.3
+0.2
-0.0
-1.4
mgl
MGL
N.D.
+0.1
-0.2
-0.5
-0.9
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.2
+0.0
+0.2
-1.4
mgl
MGL
N.D.
+0.3
-0.2
-0.3
-1.2
nf
NF
N.D.
-0.0
-0.1
-0.1
-1.1
nf_with_fulln
NF_with_fullN
N.D.
-0.3
+0.2
-0.3
-1.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.1
+0.1
-0.2
-1.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.0
-0.0
-0.3
-0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.2
-0.4
-0.2
-0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.1
-0.1
+0.1
-1.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.0
+0.3
-0.6
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.0
+0.2
-0.0
-1.2
mgl
MGL
N.D.
+0.1
+0.0
-0.5
-0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
+0.0
+0.2
-0.9
nf_with_fulln
NF_with_fullN
N.D.
-0.1
+0.2
+0.3
-1.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
-0.1
+0.1
-1.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.3
-0.1
-0.4
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.2
-0.2
+0.2
-1.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.0
+0.2
+0.2
-1.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
+0.3
-0.3
+1.1
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