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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00959 and MPMX19_00960 are separated by 118 nucleotides
MPMX19_00960 and MPMX19_00961 overlap by 4 nucleotides
MPMX19_00961 and MPMX19_00962 overlap by 4 nucleotides
MPMX19_00962 and MPMX19_00963 are separated by 9 nucleotides
MPMX19_00959: MPMX19_00959 - Adaptive-response sensory-kinase SasA, at 998,192 to 999,952
_00959
MPMX19_00960: MPMX19_00960 - hypothetical protein, at 1,000,071 to 1,000,622
_00960
MPMX19_00961: MPMX19_00961 - hypothetical protein, at 1,000,619 to 1,001,044
_00961
MPMX19_00962: MPMX19_00962 - Adaptive-response sensory-kinase SasA, at 1,001,041 to 1,002,090
_00962
MPMX19_00963: MPMX19_00963 - Transcriptional regulatory protein OmpR, at 1,002,100 to 1,002,861
_00963
Group
Condition
MPMX19
_00959
MPMX19
_00960
MPMX19
_00961
MPMX19
_00962
MPMX19
_00963
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.4
-0.3
-0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.3
-0.1
-0.1
-0.0
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.1
-0.1
-0.0
mgl
MGL
-0.2
+0.2
+0.0
-0.2
-0.2
mgl
MGL
+0.0
+0.2
-0.2
-0.0
-0.4
nf
NF
-0.1
+0.0
+0.0
+0.1
-0.3
mgl
MGL
-0.0
+0.2
-0.2
+0.3
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.3
+0.1
-0.3
+0.2
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.1
-0.2
+0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.2
+0.2
+0.1
-0.1
nf
NF
+0.1
-0.2
-0.1
+0.1
+0.0
mgl
MGL
-0.1
+0.1
-0.2
+0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.0
+0.3
-0.3
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.4
+0.0
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.2
+0.1
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.1
+0.2
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
-0.1
+0.2
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
-0.2
+0.0
+0.2
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.2
+0.2
+0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
-0.1
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
-0.1
+0.0
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.0
+0.1
-0.0
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.3
+0.1
+0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.0
+0.2
+0.2
+0.2
mgl
MGL
-0.1
-0.0
+0.3
-0.1
+0.4
mgl
MGL
-0.0
+0.4
+0.2
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.1
+0.3
+0.2
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.1
+0.1
+0.1
+0.1
nl-ccm_agar
NL-CCM_agar
+0.1
+0.1
+0.1
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.4
+0.4
+0.1
-0.2
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