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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00881 and MPMX19_00882 are separated by 154 nucleotides
MPMX19_00882 and MPMX19_00883 are separated by 230 nucleotides
MPMX19_00883 and MPMX19_00884 are separated by 567 nucleotides
MPMX19_00884 and MPMX19_00885 are separated by 119 nucleotides
MPMX19_00881: MPMX19_00881 - hypothetical protein, at 914,408 to 914,968
_00881
MPMX19_00882: MPMX19_00882 - Metalloprotease TldD, at 915,123 to 916,556
_00882
MPMX19_00883: MPMX19_00883 - hypothetical protein, at 916,787 to 918,172
_00883
MPMX19_00884: MPMX19_00884 - Cytochrome c oxidase subunit 2, at 918,740 to 919,588
_00884
MPMX19_00885: MPMX19_00885 - Cytochrome c oxidase subunit 1, at 919,708 to 921,327
_00885
Group
Condition
MPMX19
_00881
MPMX19
_00882
MPMX19
_00883
MPMX19
_00884
MPMX19
_00885
mgl
MGL
-0.2
-0.8
+0.1
+0.2
-0.4
mgl
MGL
+0.2
-0.7
-0.4
-0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.4
+0.1
-0.3
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.3
-0.0
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
-0.1
-0.2
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.5
-0.0
-0.1
-0.2
mgl
MGL
+0.1
-0.6
-0.2
+0.3
-0.5
mgl
MGL
+0.1
-0.8
+0.0
-0.0
-0.0
nf_with_fulln
NF_with_fullN
-0.0
-0.4
+0.1
-0.3
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.6
-0.0
+0.0
-0.0
mgl
MGL
-0.1
-0.9
+0.1
+0.1
+0.2
nln
NLN
+0.1
-0.2
+0.0
-0.2
-0.3
nf_with_fulln
NF_with_fullN
-0.0
-0.3
+0.1
-0.2
-0.2
mgl
MGL
+0.2
-0.3
-0.0
-0.2
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.2
-0.2
-0.0
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.2
-0.2
-0.0
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.2
-0.1
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.0
+0.2
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
-0.3
+0.1
+0.1
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
-0.1
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.6
-0.1
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.3
-0.1
-0.3
+0.0
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
-0.2
+0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.2
+0.2
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
+0.0
-0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.1
+0.1
-0.2
-0.0
nl-ccm
NL-CCM, start OD=0.3
+0.0
-0.2
+0.2
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.2
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
-0.3
+0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.4
+0.1
+0.3
+0.4
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