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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00841 and MPMX19_00842 overlap by 4 nucleotides
MPMX19_00842 and MPMX19_00843 are separated by 0 nucleotides
MPMX19_00843 and MPMX19_00844 overlap by 8 nucleotides
MPMX19_00844 and MPMX19_00845 are separated by 93 nucleotides
MPMX19_00841: MPMX19_00841 - Holo-[acyl-carrier-protein] synthase, at 873,525 to 874,004
_00841
MPMX19_00842: MPMX19_00842 - Signal peptidase I, at 874,001 to 874,768
_00842
MPMX19_00843: MPMX19_00843 - Ribonuclease 3, at 874,769 to 875,554
_00843
MPMX19_00844: MPMX19_00844 - GTPase Era, at 875,547 to 876,731
_00844
MPMX19_00845: MPMX19_00845 - hypothetical protein, at 876,825 to 877,130
_00845
Group
Condition
MPMX19
_00841
MPMX19
_00842
MPMX19
_00843
MPMX19
_00844
MPMX19
_00845
nl-ccm
NL-CCM, start OD=0.1
-2.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.9
N.D.
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-1.8
N.D.
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.7
N.D.
N.D.
N.D.
N.D.
nf
NF
-1.6
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.5
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.4
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.3
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.2
N.D.
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
-1.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.2
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-1.1
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.1
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.1
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-1.0
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.0
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.9
N.D.
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.9
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.9
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.9
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.8
N.D.
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-0.8
N.D.
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
N.D.
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.7
N.D.
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.7
N.D.
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.7
N.D.
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.7
N.D.
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.8
N.D.
N.D.
N.D.
N.D.
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