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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00758 and MPMX19_00759 are separated by 91 nucleotides
MPMX19_00759 and MPMX19_00760 are separated by 116 nucleotides
MPMX19_00760 and MPMX19_00761 are separated by 200 nucleotides
MPMX19_00761 and MPMX19_00762 are separated by 145 nucleotides
MPMX19_00758: MPMX19_00758 - putative protein YqeY, at 773,686 to 774,150
_00758
MPMX19_00759: MPMX19_00759 - hypothetical protein, at 774,242 to 774,838
_00759
MPMX19_00760: MPMX19_00760 - DNA primase, at 774,955 to 776,862
_00760
MPMX19_00761: MPMX19_00761 - RNA polymerase sigma factor RpoD, at 777,063 to 779,096
_00761
MPMX19_00762: MPMX19_00762 - tRNA-Met, at 779,242 to 779,317
_00762
Group
Condition
MPMX19
_00758
MPMX19
_00759
MPMX19
_00760
MPMX19
_00761
MPMX19
_00762
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.2
N.D.
N.D.
N.D.
mgl
MGL
-0.8
+0.2
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.4
-0.2
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.2
-0.2
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.3
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.0
N.D.
N.D.
N.D.
nln
NLN
-0.2
-0.1
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
N.D.
N.D.
N.D.
nln
NLN
-0.2
+0.0
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
+0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.0
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.2
N.D.
N.D.
N.D.
nln
NLN
-0.2
+0.1
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.2
N.D.
N.D.
N.D.
nf
NF
-0.1
+0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.3
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.0
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
N.D.
N.D.
N.D.
mgl
MGL
-0.0
+0.3
N.D.
N.D.
N.D.
mgl
MGL
-0.1
+0.4
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
+0.1
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
+0.1
N.D.
N.D.
N.D.
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