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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00693 and MPMX19_00694 are separated by 123 nucleotides
MPMX19_00694 and MPMX19_00695 are separated by 172 nucleotides
MPMX19_00695 and MPMX19_00696 are separated by 36 nucleotides
MPMX19_00696 and MPMX19_00697 are separated by 3 nucleotides
MPMX19_00693: MPMX19_00693 - 5-formyltetrahydrofolate cyclo-ligase, at 715,352 to 715,942
_00693
MPMX19_00694: MPMX19_00694 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase, at 716,066 to 716,890
_00694
MPMX19_00695: MPMX19_00695 - putative transcriptional regulatory protein, at 717,063 to 717,815
_00695
MPMX19_00696: MPMX19_00696 - Crossover junction endodeoxyribonuclease RuvC, at 717,852 to 718,940
_00696
MPMX19_00697: MPMX19_00697 - Holliday junction ATP-dependent DNA helicase RuvA, at 718,944 to 719,570
_00697
Group
Condition
MPMX19
_00693
MPMX19
_00694
MPMX19
_00695
MPMX19
_00696
MPMX19
_00697
nln
NLN
-1.7
-1.7
-0.9
-0.5
N.D.
nln
NLN
-1.7
-2.0
-0.4
-0.5
N.D.
mgl
MGL
-0.0
-1.3
-1.8
-0.8
N.D.
nln
NLN
-1.6
-1.3
-0.5
-0.3
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-2.0
-0.2
-1.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-1.8
-0.7
-0.4
N.D.
nf_with_fulln
NF_with_fullN
+0.1
-2.5
-0.5
-0.2
N.D.
mgl
MGL
-0.6
-1.1
-0.7
-0.5
N.D.
mgl
MGL
-0.2
-0.5
-1.1
-1.0
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-2.0
-0.4
-0.5
N.D.
nln
NLN
-1.0
-1.2
-0.6
+0.1
N.D.
nln
NLN
-1.2
-1.2
+0.0
-0.1
N.D.
mgl
MGL
-0.6
-0.5
-0.9
-0.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-1.5
-0.3
-0.6
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-1.2
-1.1
-0.1
N.D.
mgl
MGL
-0.1
-1.1
-0.5
-0.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.5
-1.1
-0.5
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-1.4
-0.3
-0.4
N.D.
nln
NLN
-0.4
-0.9
+0.1
-1.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-1.7
+0.2
-0.4
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.2
-1.7
-0.3
-0.3
N.D.
nf
NF
+0.1
-1.3
+0.1
-0.6
N.D.
nln
NLN
-0.7
-0.0
+0.4
-1.1
N.D.
nln
NLN
-0.8
-0.3
+0.7
-0.7
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-1.4
+0.5
-0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.6
-1.1
-1.3
-0.9
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.0
-1.3
-0.1
-1.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.3
-1.4
-0.6
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.4
-1.5
-0.5
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.7
-1.3
+0.0
-0.3
N.D.
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