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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00680 and MPMX19_00681 are separated by 65 nucleotides
MPMX19_00681 and MPMX19_00682 are separated by 257 nucleotides
MPMX19_00682 and MPMX19_00683 are separated by 145 nucleotides
MPMX19_00683 and MPMX19_00684 are separated by 3 nucleotides
MPMX19_00680: MPMX19_00680 - Elongation factor P--(R)-beta-lysine ligase, at 702,357 to 703,424
_00680
MPMX19_00681: MPMX19_00681 - 47 kDa outer membrane protein, at 703,490 to 704,818
_00681
MPMX19_00682: MPMX19_00682 - putative membrane transporter protein YfcA, at 705,076 to 705,882
_00682
MPMX19_00683: MPMX19_00683 - Thiamine-phosphate synthase, at 706,028 to 706,699
_00683
MPMX19_00684: MPMX19_00684 - Fructose-bisphosphate aldolase class 1, at 706,703 to 707,632
_00684
Group
Condition
MPMX19
_00680
MPMX19
_00681
MPMX19
_00682
MPMX19
_00683
MPMX19
_00684
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-2.0
-0.0
-0.1
N.D.
N.D.
mgl
MGL
-2.3
+0.1
+0.1
N.D.
N.D.
mgl
MGL
-1.9
+0.0
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.7
-0.2
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.6
-0.2
-0.0
N.D.
N.D.
mgl
MGL
-1.6
+0.1
-0.2
N.D.
N.D.
mgl
MGL
-1.4
+0.0
-0.3
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.3
+0.0
-0.2
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-1.4
+0.0
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.3
-0.1
-0.0
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.3
-0.1
+0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.0
-0.1
-0.1
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.1
-0.2
-0.0
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.2
+0.1
-0.1
N.D.
N.D.
nln
NLN
-1.2
-0.1
+0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.3
+0.0
+0.0
N.D.
N.D.
mgl
MGL
-1.1
-0.0
-0.1
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-1.0
-0.0
-0.1
N.D.
N.D.
nf
NF
-0.6
-0.3
-0.2
N.D.
N.D.
mgl
MGL
-1.1
+0.0
+0.0
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.8
-0.1
-0.1
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.9
+0.0
-0.0
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.6
-0.4
-0.0
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+1.0
-0.5
-0.0
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+1.0
-0.2
+0.0
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+1.4
-0.2
-0.2
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
-0.1
-0.1
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+1.3
-0.3
+0.2
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+1.6
-0.3
-0.0
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+1.2
-0.2
+0.2
N.D.
N.D.
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