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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00668 and MPMX19_00669 are separated by 417 nucleotides
MPMX19_00669 and MPMX19_00670 are separated by 54 nucleotides
MPMX19_00670 and MPMX19_00671 are separated by 185 nucleotides
MPMX19_00671 and MPMX19_00672 overlap by 4 nucleotides
MPMX19_00668: MPMX19_00668 - tRNA-Glu, at 691,074 to 691,149
_00668
MPMX19_00669: MPMX19_00669 - hypothetical protein, at 691,567 to 691,851
_00669
MPMX19_00670: MPMX19_00670 - tRNA-dihydrouridine(20/20a) synthase, at 691,906 to 692,931
_00670
MPMX19_00671: MPMX19_00671 - Threonine synthase, at 693,117 to 694,538
_00671
MPMX19_00672: MPMX19_00672 - putative zinc protease, at 694,535 to 695,794
_00672
Group
Condition
MPMX19
_00668
MPMX19
_00669
MPMX19
_00670
MPMX19
_00671
MPMX19
_00672
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.4
-0.1
N.D.
-0.6
nf_with_fulln
NF_with_fullN
N.D.
-0.6
-0.1
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
-0.0
N.D.
-0.4
mgl
MGL
N.D.
-0.2
-0.2
N.D.
-0.5
nf_with_fulln
NF_with_fullN
N.D.
-0.5
+0.2
N.D.
-0.4
nf_with_fulln
NF_with_fullN
N.D.
-0.2
+0.2
N.D.
-0.5
nf_with_fulln
NF_with_fullN
N.D.
-0.3
+0.1
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.2
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.3
-0.3
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.2
+0.2
N.D.
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
+0.3
N.D.
-0.4
mgl
MGL
N.D.
+0.3
+0.1
N.D.
-0.6
nf_with_fulln
NF_with_fullN
N.D.
-0.3
+0.2
N.D.
-0.1
mgl
MGL
N.D.
+0.2
-0.1
N.D.
-0.3
nln
NLN
N.D.
-0.2
+0.2
N.D.
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.2
+0.3
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.3
-0.0
N.D.
-0.4
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.3
-0.1
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.3
-0.1
N.D.
-0.2
mgl
MGL
N.D.
+0.5
-0.0
N.D.
-0.3
mgl
MGL
N.D.
+0.4
+0.1
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.4
+0.3
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.5
-0.0
N.D.
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.2
+0.3
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.2
+0.3
N.D.
-0.2
nf
NF
N.D.
+0.3
-0.1
N.D.
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.3
+0.2
N.D.
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
+0.3
+0.2
N.D.
+0.1
mgl
MGL
N.D.
+0.5
+0.3
N.D.
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.4
+0.3
N.D.
-0.0
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