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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00660 and MPMX19_00661 overlap by 4 nucleotides
MPMX19_00661 and MPMX19_00662 are separated by 173 nucleotides
MPMX19_00662 and MPMX19_00663 are separated by 1011 nucleotides
MPMX19_00663 and MPMX19_00664 are separated by 44 nucleotides
MPMX19_00660: MPMX19_00660 - C4-dicarboxylate TRAP transporter small permease protein DctQ, at 681,790 to 682,359
_00660
MPMX19_00661: MPMX19_00661 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 682,356 to 683,654
_00661
MPMX19_00662: MPMX19_00662 - Periplasmic nitrate reductase, at 683,828 to 685,879
_00662
MPMX19_00663: MPMX19_00663 - hypothetical protein, at 686,891 to 687,526
_00663
MPMX19_00664: MPMX19_00664 - hypothetical protein, at 687,571 to 687,858
_00664
Group
Condition
MPMX19
_00660
MPMX19
_00661
MPMX19
_00662
MPMX19
_00663
MPMX19
_00664
nf_with_fulln
NF_with_fullN
+0.0
+0.1
-0.0
-0.7
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.1
-0.4
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.0
-0.5
-0.5
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.0
-0.1
-0.9
+0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.2
-0.0
-0.6
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.0
-0.1
-0.2
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.0
-0.4
+0.0
-0.6
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.0
+0.0
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.2
+0.1
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.0
-0.4
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.0
-0.3
-0.5
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.1
-0.1
-0.7
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.1
+0.0
-0.5
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.0
-0.3
-0.2
+0.3
nl-ccm
NL-CCM, start OD=0.1
-0.0
-0.1
-0.2
-0.5
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.3
-0.1
+0.4
nf
NF
+0.1
-0.1
-0.1
+0.4
-0.3
nln
NLN
-0.1
-0.1
+0.0
-0.3
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.2
+0.4
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.0
-0.1
+0.5
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.0
-0.3
+0.0
+0.5
mgl
MGL
+0.1
+0.1
-0.1
+0.0
+0.6
mgl
MGL
-0.1
+0.0
-0.0
+0.7
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
-0.1
+0.6
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.3
+0.1
+0.8
-0.0
mgl
MGL
+0.0
-0.1
+0.3
+0.2
+1.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.3
+0.0
+1.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.3
+0.0
+0.8
+0.3
mgl
MGL
-0.0
-0.1
+0.2
+0.6
+1.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
+0.3
+1.2
+0.9
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