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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00653 and MPMX19_00654 are separated by 102 nucleotides
MPMX19_00654 and MPMX19_00655 are separated by 562 nucleotides
MPMX19_00655 and MPMX19_00656 are separated by 39 nucleotides
MPMX19_00656 and MPMX19_00657 are separated by 122 nucleotides
MPMX19_00653: MPMX19_00653 - hypothetical protein, at 672,584 to 673,084
_00653
MPMX19_00654: MPMX19_00654 - hypothetical protein, at 673,187 to 673,834
_00654
MPMX19_00655: MPMX19_00655 - hypothetical protein, at 674,397 to 675,704
_00655
MPMX19_00656: MPMX19_00656 - Sensor histidine kinase RcsC, at 675,744 to 677,462
_00656
MPMX19_00657: MPMX19_00657 - Response regulator protein TmoT, at 677,585 to 678,181
_00657
Group
Condition
MPMX19
_00653
MPMX19
_00654
MPMX19
_00655
MPMX19
_00656
MPMX19
_00657
nln
NLN
-1.5
+0.0
-0.3
+0.2
N.D.
nln
NLN
-1.8
-0.0
+0.2
+0.1
N.D.
nln
NLN
-1.4
-0.1
+0.2
+0.0
N.D.
nln
NLN
-0.9
+0.2
-0.3
-0.1
N.D.
nln
NLN
-1.5
+0.0
+0.3
+0.1
N.D.
nln
NLN
-1.2
+0.1
+0.1
-0.1
N.D.
nln
NLN
-1.1
+0.2
-0.2
-0.1
N.D.
mgl
MGL
-0.3
+0.0
-0.8
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.0
-0.9
-0.2
N.D.
nln
NLN
-1.1
-0.1
+0.2
-0.0
N.D.
nln
NLN
-1.2
+0.1
+0.1
+0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.2
-0.5
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.0
-0.9
+0.0
N.D.
nf
NF
-0.0
-0.0
-0.8
-0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.1
-0.7
+0.0
N.D.
nl-ccm_agar
NL-CCM_agar
-0.5
+0.1
-0.2
-0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-0.1
-0.9
+0.1
N.D.
nln
NLN
-1.1
+0.2
+0.1
+0.0
N.D.
nln
NLN
-0.9
+0.2
-0.1
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.5
+0.0
+0.4
-0.5
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.1
+0.3
-0.4
N.D.
mgl
MGL
-0.6
+0.2
+0.2
-0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.4
+0.1
+0.4
-0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.4
-0.3
-0.3
+0.2
N.D.
mgl
MGL
-0.5
+0.5
+0.2
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.6
+0.3
-0.5
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.9
+0.2
-0.8
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.9
+0.1
-0.1
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+2.9
+0.3
-0.2
-0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+3.0
+0.2
-0.1
-0.1
N.D.
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