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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00641 and MPMX19_00642 are separated by 120 nucleotides
MPMX19_00642 and MPMX19_00643 are separated by 22 nucleotides
MPMX19_00643 and MPMX19_00644 are separated by 112 nucleotides
MPMX19_00644 and MPMX19_00645 are separated by 102 nucleotides
MPMX19_00641: MPMX19_00641 - hypothetical protein, at 659,285 to 659,860
_00641
MPMX19_00642: MPMX19_00642 - Diguanylate cyclase VdcA, at 659,981 to 661,009
_00642
MPMX19_00643: MPMX19_00643 - Nitronate monooxygenase, at 661,032 to 662,111
_00643
MPMX19_00644: MPMX19_00644 - putative ABC transporter ATP-binding protein YheS, at 662,224 to 663,846
_00644
MPMX19_00645: MPMX19_00645 - HTH-type transcriptional regulator MetR, at 663,949 to 664,836
_00645
Group
Condition
MPMX19
_00641
MPMX19
_00642
MPMX19
_00643
MPMX19
_00644
MPMX19
_00645
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.0
-0.2
+0.1
-0.3
nf_with_fulln
NF_with_fullN
N.D.
-0.4
+0.2
-0.2
+0.0
mgl
MGL
N.D.
+0.1
-0.6
+0.3
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.0
-0.3
+0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.0
-0.2
+0.1
-0.2
mgl
MGL
N.D.
-0.1
-0.3
+0.3
-0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.1
-0.3
+0.2
-0.0
nf_with_fulln
NF_with_fullN
N.D.
-0.2
+0.2
-0.1
-0.0
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.2
-0.2
-0.0
-0.1
mgl
MGL
N.D.
+0.0
-0.2
+0.2
-0.1
nf_with_fulln
NF_with_fullN
N.D.
-0.1
+0.1
-0.1
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
-0.2
+0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
-0.2
+0.1
-0.1
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
-0.3
+0.2
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-0.2
+0.1
+0.0
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
-0.2
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.1
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.0
-0.2
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.1
-0.2
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.0
-0.2
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.1
-0.2
+0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
-0.1
+0.2
-0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.0
-0.1
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.0
-0.2
+0.3
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.2
-0.1
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.2
-0.1
+0.1
+0.1
nln
NLN
N.D.
-0.1
+0.0
+0.1
+0.2
mgl
MGL
N.D.
+0.2
+0.1
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.2
-0.1
+0.2
+0.0
mgl
MGL
N.D.
+0.1
+0.0
+0.5
-0.0
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