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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00609 and MPMX19_00610 are separated by 33 nucleotides
MPMX19_00610 and MPMX19_00611 are separated by 28 nucleotides
MPMX19_00611 and MPMX19_00612 are separated by 219 nucleotides
MPMX19_00612 and MPMX19_00613 are separated by 31 nucleotides
MPMX19_00609: MPMX19_00609 - Chemotaxis protein CheY, at 623,086 to 623,481
_00609
MPMX19_00610: MPMX19_00610 - hypothetical protein, at 623,515 to 624,939
_00610
MPMX19_00611: MPMX19_00611 - (3S)-malyl-CoA thioesterase, at 624,968 to 625,837
_00611
MPMX19_00612: MPMX19_00612 - Pyridoxal kinase PdxY, at 626,057 to 626,917
_00612
MPMX19_00613: MPMX19_00613 - Sensor histidine kinase RcsC, at 626,949 to 629,123
_00613
Group
Condition
MPMX19
_00609
MPMX19
_00610
MPMX19
_00611
MPMX19
_00612
MPMX19
_00613
nl-ccm
NL-CCM, start OD=0.3
-1.3
-0.2
-0.1
-0.2
+0.1
nf_with_fulln
NF_with_fullN
-0.5
-0.2
-0.5
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
-0.1
-0.4
-0.0
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.2
-0.8
-0.1
+0.0
mgl
MGL
-1.7
-0.1
+0.4
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.7
-0.1
-0.1
-0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.3
-0.0
-0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
-0.1
-0.1
+0.0
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.9
-0.0
-0.2
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
-0.3
-0.2
+0.1
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.7
+0.0
+0.1
-0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.1
-0.1
+0.4
-0.0
-0.1
mgl
MGL
-0.4
+0.1
-0.3
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.6
-0.0
-0.2
-0.2
+0.1
nf_with_fulln
NF_with_fullN
-0.4
-0.2
-0.2
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
-0.6
-0.0
-0.0
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.2
+0.2
-0.1
-0.1
mgl
MGL
-0.1
-0.0
-0.6
-0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.0
-0.4
+0.0
+0.2
nf
NF
-0.7
-0.1
+0.1
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.8
-0.1
+0.3
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.6
-0.1
-0.1
-0.0
+0.2
nln
NLN
-0.5
-0.1
+0.4
-0.1
-0.2
nln
NLN
+0.1
+0.0
-0.5
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.4
-0.2
+0.3
+0.0
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
-0.1
+0.5
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.3
+0.6
+0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.1
+0.4
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.9
+0.2
+0.4
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+1.0
+0.3
+0.3
-0.2
+0.3
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