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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00600 and MPMX19_00601 are separated by 4 nucleotides
MPMX19_00601 and MPMX19_00602 overlap by 8 nucleotides
MPMX19_00602 and MPMX19_00603 are separated by 91 nucleotides
MPMX19_00603 and MPMX19_00604 overlap by 1 nucleotides
MPMX19_00600: MPMX19_00600 - hypothetical protein, at 615,251 to 615,532
_00600
MPMX19_00601: MPMX19_00601 - hypothetical protein, at 615,537 to 615,797
_00601
MPMX19_00602: MPMX19_00602 - Diaminopimelate epimerase, at 615,790 to 616,641
_00602
MPMX19_00603: MPMX19_00603 - hypothetical protein, at 616,733 to 617,161
_00603
MPMX19_00604: MPMX19_00604 - hypothetical protein, at 617,161 to 618,234
_00604
Group
Condition
MPMX19
_00600
MPMX19
_00601
MPMX19
_00602
MPMX19
_00603
MPMX19
_00604
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.2
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
-0.5
-0.2
N.D.
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
-0.6
-0.2
N.D.
N.D.
+0.0
nl-ccm_agar
NL-CCM_agar
-0.5
-0.1
N.D.
N.D.
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.3
N.D.
N.D.
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.6
-0.1
N.D.
N.D.
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.3
N.D.
N.D.
-0.2
mgl
MGL
-0.4
-0.1
N.D.
N.D.
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.2
N.D.
N.D.
-0.0
mgl
MGL
-0.6
+0.1
N.D.
N.D.
-0.1
mgl
MGL
-0.4
+0.1
N.D.
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.4
N.D.
N.D.
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
+0.1
N.D.
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
-0.1
N.D.
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.2
N.D.
N.D.
-0.0
nln
NLN
+0.4
-0.1
N.D.
N.D.
-0.1
nln
NLN
+0.5
-0.1
N.D.
N.D.
-0.1
nln
NLN
+0.3
+0.2
N.D.
N.D.
-0.1
nln
NLN
+0.7
-0.1
N.D.
N.D.
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
-0.2
N.D.
N.D.
+0.4
nf_with_fulln
NF_with_fullN
+0.7
-0.0
N.D.
N.D.
+0.4
nf_with_fulln
NF_with_fullN
+0.7
-0.0
N.D.
N.D.
+0.3
nf_with_fulln
NF_with_fullN
+0.6
+0.0
N.D.
N.D.
+0.5
nf_with_fulln
NF_with_fullN
+0.5
+0.1
N.D.
N.D.
+0.6
nf_with_fulln
NF_with_fullN
+0.7
-0.0
N.D.
N.D.
+0.5
nf_with_fulln
NF_with_fullN
+1.0
-0.0
N.D.
N.D.
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+1.0
+0.3
N.D.
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+1.1
+0.3
N.D.
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+1.4
-0.1
N.D.
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+1.5
+0.1
N.D.
N.D.
+0.6
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