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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00547 and MPMX19_00548 are separated by 13 nucleotides
MPMX19_00548 and MPMX19_00549 are separated by 18 nucleotides
MPMX19_00549 and MPMX19_00550 overlap by 4 nucleotides
MPMX19_00550 and MPMX19_00551 are separated by 10 nucleotides
MPMX19_00547: MPMX19_00547 - hypothetical protein, at 561,526 to 561,777
_00547
MPMX19_00548: MPMX19_00548 - Periplasmic nitrate reductase, at 561,791 to 564,691
_00548
MPMX19_00549: MPMX19_00549 - Formate dehydrogenase iron-sulfur subunit, at 564,710 to 565,387
_00549
MPMX19_00550: MPMX19_00550 - hypothetical protein, at 565,384 to 565,578
_00550
MPMX19_00551: MPMX19_00551 - hypothetical protein, at 565,589 to 566,647
_00551
Group
Condition
MPMX19
_00547
MPMX19
_00548
MPMX19
_00549
MPMX19
_00550
MPMX19
_00551
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.0
-0.5
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
-0.1
N.D.
-0.2
mgl
MGL
N.D.
-0.0
-0.2
N.D.
-0.2
nln
NLN
N.D.
-0.0
-0.1
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.0
+0.1
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.2
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.0
+0.1
N.D.
-0.2
nf_with_fulln
NF_with_fullN
N.D.
-0.1
-0.2
N.D.
+0.2
mgl
MGL
N.D.
+0.1
-0.3
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.0
+0.1
N.D.
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.1
-0.2
N.D.
+0.0
nln
NLN
N.D.
+0.1
-0.2
N.D.
+0.1
mgl
MGL
N.D.
+0.1
+0.2
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
+0.1
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
+0.3
N.D.
-0.1
mgl
MGL
N.D.
+0.3
+0.0
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
+0.0
N.D.
+0.1
nln
NLN
N.D.
+0.1
+0.2
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.1
+0.0
N.D.
+0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.1
+0.2
N.D.
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.1
+0.1
N.D.
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.0
+0.2
N.D.
+0.2
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
+0.0
N.D.
+0.2
nf
NF
N.D.
-0.0
+0.2
N.D.
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
+0.3
N.D.
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.1
+0.1
N.D.
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.1
+0.2
N.D.
+0.2
mgl
MGL
N.D.
+0.2
+0.3
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.2
+0.1
N.D.
+0.2
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
+0.2
N.D.
+0.2
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