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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00544 and MPMX19_00545 overlap by 4 nucleotides
MPMX19_00545 and MPMX19_00546 are separated by 452 nucleotides
MPMX19_00546 and MPMX19_00547 are separated by 16 nucleotides
MPMX19_00547 and MPMX19_00548 are separated by 13 nucleotides
MPMX19_00544: MPMX19_00544 - hypothetical protein, at 559,394 to 559,903
_00544
MPMX19_00545: MPMX19_00545 - hypothetical protein, at 559,900 to 560,430
_00545
MPMX19_00546: MPMX19_00546 - Chaperone protein TorD, at 560,883 to 561,509
_00546
MPMX19_00547: MPMX19_00547 - hypothetical protein, at 561,526 to 561,777
_00547
MPMX19_00548: MPMX19_00548 - Periplasmic nitrate reductase, at 561,791 to 564,691
_00548
Group
Condition
MPMX19
_00544
MPMX19
_00545
MPMX19
_00546
MPMX19
_00547
MPMX19
_00548
nln
NLN
-1.1
-0.1
+0.1
N.D.
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.1
+0.2
+0.1
N.D.
-0.0
nf_with_fulln
NF_with_fullN
-0.4
-0.0
-0.3
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
-0.1
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.3
+0.0
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
+0.1
+0.0
N.D.
+0.1
mgl
MGL
-0.1
-0.5
+0.1
N.D.
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.3
+0.0
N.D.
+0.1
nf
NF
+0.5
-0.3
-0.1
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.3
-0.0
N.D.
+0.0
nf_with_fulln
NF_with_fullN
+0.5
-0.1
-0.2
N.D.
-0.1
nf_with_fulln
NF_with_fullN
+0.9
-0.4
-0.2
N.D.
-0.0
nln
NLN
+0.7
-0.2
-0.2
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.3
-0.1
N.D.
-0.1
mgl
MGL
+0.3
-0.3
+0.2
N.D.
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
-0.1
+0.1
N.D.
+0.1
nf_with_fulln
NF_with_fullN
+0.6
+0.3
-0.2
N.D.
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.1
+0.3
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.7
-0.0
-0.0
N.D.
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.7
-0.0
+0.1
N.D.
+0.0
nln
NLN
+0.8
+0.0
-0.1
N.D.
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.7
+0.1
+0.0
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.6
+0.1
+0.2
N.D.
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.4
+0.2
+0.2
N.D.
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
+0.0
+0.1
N.D.
+0.1
mgl
MGL
+1.1
-0.0
-0.0
N.D.
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+1.4
+0.3
-0.5
N.D.
-0.0
nl-ccm
NL-CCM, start OD=0.1
+0.8
+0.1
+0.1
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.6
+0.4
+0.1
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
+1.0
+0.1
+0.1
N.D.
+0.1
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