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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00504 and MPMX19_00505 are separated by 343 nucleotides
MPMX19_00505 and MPMX19_00506 are separated by 330 nucleotides
MPMX19_00506 and MPMX19_00507 are separated by 509 nucleotides
MPMX19_00507 and MPMX19_00508 are separated by 66 nucleotides
MPMX19_00504: MPMX19_00504 - ATP-dependent Clp protease adapter protein ClpS, at 507,786 to 508,112
_00504
MPMX19_00505: MPMX19_00505 - hypothetical protein, at 508,456 to 508,935
_00505
MPMX19_00506: MPMX19_00506 - hypothetical protein, at 509,266 to 509,790
_00506
MPMX19_00507: MPMX19_00507 - hypothetical protein, at 510,300 to 511,061
_00507
MPMX19_00508: MPMX19_00508 - hypothetical protein, at 511,128 to 511,955
_00508
Group
Condition
MPMX19
_00504
MPMX19
_00505
MPMX19
_00506
MPMX19
_00507
MPMX19
_00508
mgl
MGL
-0.3
-0.5
+0.0
-0.1
-0.6
mgl
MGL
-0.6
-0.4
+0.2
-0.1
-0.2
nl-ccm_agar
NL-CCM_agar
-1.0
-0.1
-0.0
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
-0.3
+0.0
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.9
-0.2
+0.2
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.7
-0.1
+0.2
+0.0
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
-0.1
+0.2
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.7
-0.1
+0.0
+0.1
-0.0
nf_with_fulln
NF_with_fullN
-0.6
-0.1
+0.2
-0.1
-0.1
nl-ccm_agar
NL-CCM_agar
-1.0
-0.1
+0.0
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.0
+0.3
+0.1
+0.0
-0.1
mgl
MGL
+0.1
-0.4
-0.1
+0.1
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.7
-0.2
+0.2
+0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
-0.3
+0.1
+0.0
+0.0
nf
NF
-0.6
-0.1
+0.2
+0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.5
+0.1
+0.2
-0.1
-0.1
nln
NLN
-0.5
+0.1
+0.1
-0.0
-0.2
nf_with_fulln
NF_with_fullN
-0.6
+0.2
+0.2
-0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.3
+0.2
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
+0.1
+0.1
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.6
+0.1
+0.1
+0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.4
+0.3
+0.0
-0.3
-0.1
nf_with_fulln
NF_with_fullN
-0.6
+0.2
+0.1
+0.0
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
+0.1
+0.1
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.5
-0.1
+0.1
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.1
+0.6
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-1.0
+0.4
+0.6
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.4
+0.5
-0.0
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.4
+0.5
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.1
+0.6
+0.0
-0.2
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