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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00495 and MPMX19_00496 are separated by 30 nucleotides
MPMX19_00496 and MPMX19_00497 overlap by 4 nucleotides
MPMX19_00497 and MPMX19_00498 overlap by 4 nucleotides
MPMX19_00498 and MPMX19_00499 are separated by 301 nucleotides
MPMX19_00495: MPMX19_00495 - hypothetical protein, at 494,559 to 495,191
_00495
MPMX19_00496: MPMX19_00496 - hypothetical protein, at 495,222 to 496,658
_00496
MPMX19_00497: MPMX19_00497 - Sensor histidine kinase RcsC, at 496,655 to 499,318
_00497
MPMX19_00498: MPMX19_00498 - Sensor histidine kinase RcsC, at 499,315 to 501,720
_00498
MPMX19_00499: MPMX19_00499 - hypothetical protein, at 502,022 to 502,327
_00499
Group
Condition
MPMX19
_00495
MPMX19
_00496
MPMX19
_00497
MPMX19
_00498
MPMX19
_00499
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.1
-0.2
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.1
-0.1
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
+0.0
-0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
-0.2
+0.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.1
+0.0
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.1
-0.1
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.2
-0.1
-0.1
+0.1
N.D.
mgl
MGL
-0.1
+0.0
-0.2
+0.0
N.D.
mgl
MGL
-0.2
+0.2
-0.0
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
-0.1
+0.1
N.D.
mgl
MGL
-0.3
-0.1
-0.1
+0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.0
-0.0
+0.2
N.D.
nln
NLN
-0.3
+0.0
+0.1
+0.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.2
+0.0
+0.0
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
-0.0
+0.2
N.D.
nln
NLN
+0.1
-0.2
+0.2
-0.0
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.1
+0.2
-0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
+0.1
+0.0
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.1
+0.1
N.D.
mgl
MGL
-0.2
+0.0
+0.1
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.1
-0.2
+0.0
+0.2
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.0
+0.1
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-0.1
+0.1
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
+0.2
-0.1
N.D.
nf
NF
+0.1
+0.1
+0.1
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.1
+0.2
-0.1
N.D.
nln
NLN
+0.3
+0.0
-0.0
+0.1
N.D.
mgl
MGL
+0.2
+0.2
-0.1
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.1
+0.2
N.D.
nf
NF
+0.3
+0.1
+0.0
+0.1
N.D.
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