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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00451 and MPMX19_00452 are separated by 220 nucleotides
MPMX19_00452 and MPMX19_00453 overlap by 4 nucleotides
MPMX19_00453 and MPMX19_00454 are separated by 94 nucleotides
MPMX19_00454 and MPMX19_00455 are separated by 135 nucleotides
MPMX19_00451: MPMX19_00451 - Putative lipid kinase BmrU, at 449,236 to 450,207
_00451
MPMX19_00452: MPMX19_00452 - UDP-2,3-diacylglucosamine hydrolase, at 450,428 to 451,276
_00452
MPMX19_00453: MPMX19_00453 - GDP-mannose-dependent alpha-mannosyltransferase, at 451,273 to 452,271
_00453
MPMX19_00454: MPMX19_00454 - Homoserine/homoserine lactone efflux protein, at 452,366 to 452,977
_00454
MPMX19_00455: MPMX19_00455 - 3-deoxy-D-manno-octulosonic acid transferase, at 453,113 to 454,399
_00455
Group
Condition
MPMX19
_00451
MPMX19
_00452
MPMX19
_00453
MPMX19
_00454
MPMX19
_00455
nf_with_fulln
NF_with_fullN
-0.5
-0.1
-0.1
-0.1
N.D.
mgl
MGL
-0.3
+0.0
-0.2
-0.3
N.D.
nf_with_fulln
NF_with_fullN
-0.4
-0.2
-0.1
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.1
-0.4
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
+0.0
-0.0
-0.2
N.D.
nln
NLN
-0.4
-0.0
+0.0
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.1
-0.3
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
-0.0
-0.0
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
+0.0
+0.0
-0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.1
-0.0
-0.2
N.D.
mgl
MGL
-0.6
+0.1
+0.1
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.2
+0.0
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.3
-0.1
-0.0
N.D.
nf
NF
-0.4
-0.0
-0.0
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.1
-0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.0
-0.0
-0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.1
-0.2
-0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.0
-0.1
+0.0
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.1
+0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.0
+0.1
-0.1
N.D.
mgl
MGL
+0.1
-0.0
-0.1
-0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.0
+0.1
-0.1
N.D.
nln
NLN
-0.2
+0.0
+0.1
-0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.1
+0.1
+0.1
N.D.
mgl
MGL
-0.1
+0.4
-0.2
-0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.0
+0.1
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.0
-0.0
+0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.1
+0.1
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.1
+0.1
+0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.1
-0.0
+0.2
N.D.
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