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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00431 and MPMX19_00432 are separated by 313 nucleotides
MPMX19_00432 and MPMX19_00433 are separated by 214 nucleotides
MPMX19_00433 and MPMX19_00434 are separated by 439 nucleotides
MPMX19_00434 and MPMX19_00435 overlap by 35 nucleotides
MPMX19_00431: MPMX19_00431 - hypothetical protein, at 431,622 to 432,335
_00431
MPMX19_00432: MPMX19_00432 - hypothetical protein, at 432,649 to 432,861
_00432
MPMX19_00433: MPMX19_00433 - Lysine/ornithine decarboxylase, at 433,076 to 434,212
_00433
MPMX19_00434: MPMX19_00434 - Protein SapB, at 434,652 to 435,218
_00434
MPMX19_00435: MPMX19_00435 - Bicyclomycin resistance protein, at 435,184 to 436,386
_00435
Group
Condition
MPMX19
_00431
MPMX19
_00432
MPMX19
_00433
MPMX19
_00434
MPMX19
_00435
mgl
MGL
-0.1
-1.1
-1.2
+0.2
+0.0
nln
NLN
-0.2
-0.4
-0.6
-0.1
-0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.4
-0.8
-0.2
+0.1
mgl
MGL
-0.1
-0.6
-0.7
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.8
-0.4
-0.1
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.6
-0.5
-0.1
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.5
-0.3
-0.2
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.7
-0.1
+0.0
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.6
-0.3
-0.1
-0.0
nf_with_fulln
NF_with_fullN
-0.2
-0.4
-0.4
-0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.7
-0.1
+0.0
nl-ccm_agar
NL-CCM_agar
-0.1
-0.5
-0.4
-0.1
+0.0
mgl
MGL
+0.2
-1.0
-0.6
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.5
-0.3
-0.1
+0.0
mgl
MGL
-0.4
-0.3
-0.2
-0.1
+0.0
mgl
MGL
-0.5
-0.3
-0.4
+0.1
+0.0
nl-ccm_agar
NL-CCM_agar
+0.2
-0.6
-0.4
-0.1
-0.0
nln
NLN
-0.1
-0.6
-0.2
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.7
+0.0
-0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.5
-0.2
-0.1
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.6
-0.1
-0.1
+0.0
nln
NLN
-0.0
-0.1
-0.7
-0.1
+0.1
nln
NLN
+0.0
-0.3
-0.4
-0.0
-0.1
nl-ccm_agar
NL-CCM_agar
-0.3
+0.2
-0.5
-0.1
-0.1
nl-ccm_agar
NL-CCM_agar
+0.1
-0.3
-0.4
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.3
+0.3
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
+0.7
-0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.2
+0.4
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.4
+0.6
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.5
+0.4
-0.1
-0.1
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