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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00421 and MPMX19_00422 are separated by 314 nucleotides
MPMX19_00422 and MPMX19_00423 are separated by 10 nucleotides
MPMX19_00423 and MPMX19_00424 are separated by 133 nucleotides
MPMX19_00424 and MPMX19_00425 are separated by 88 nucleotides
MPMX19_00421: MPMX19_00421 - Fe(3+)-binding periplasmic protein, at 420,981 to 422,024
_00421
MPMX19_00422: MPMX19_00422 - O-acetyl-L-homoserine sulfhydrylase, at 422,339 to 423,664
_00422
MPMX19_00423: MPMX19_00423 - (E)-2-((N-methylformamido)methylene)succinate hydrolase, at 423,675 to 424,490
_00423
MPMX19_00424: MPMX19_00424 - Sensor histidine kinase RcsC, at 424,624 to 426,540
_00424
MPMX19_00425: MPMX19_00425 - 7-cyano-7-deazaguanine synthase, at 426,629 to 427,357
_00425
Group
Condition
MPMX19
_00421
MPMX19
_00422
MPMX19
_00423
MPMX19
_00424
MPMX19
_00425
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
-0.4
-0.2
-0.2
mgl
MGL
-0.2
+0.1
-0.6
-0.2
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.0
-0.5
-0.0
-0.1
mgl
MGL
-0.0
+0.0
-0.4
-0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.0
+0.1
-0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.0
+0.4
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.1
+0.4
-0.1
-0.2
mgl
MGL
-0.1
-0.2
+0.3
+0.2
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.3
+0.3
+0.0
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.0
+0.3
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.1
+0.3
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.1
+0.3
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.0
+0.4
-0.1
-0.1
nln
NLN
-0.1
-0.1
+0.3
+0.1
-0.2
mgl
MGL
-0.3
+0.0
+0.4
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.1
+0.5
-0.1
+0.0
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
+0.4
-0.1
-0.0
nf_with_fulln
NF_with_fullN
+0.1
-0.2
+0.3
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.4
+0.0
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.1
+0.5
+0.0
-0.1
mgl
MGL
-0.1
-0.0
+0.5
-0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.0
+0.5
+0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.0
+0.5
-0.0
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
+0.5
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.1
+0.6
-0.1
-0.0
mgl
MGL
-0.1
+0.2
+0.5
-0.2
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.6
-0.0
-0.1
nln
NLN
-0.0
+0.0
+0.6
+0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.2
+0.6
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
+0.9
-0.2
-0.2
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