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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00411 and MPMX19_00412 are separated by 123 nucleotides
MPMX19_00412 and MPMX19_00413 overlap by 1 nucleotides
MPMX19_00413 and MPMX19_00414 are separated by 93 nucleotides
MPMX19_00414 and MPMX19_00415 are separated by 163 nucleotides
MPMX19_00411: MPMX19_00411 - 50S ribosomal protein L15, at 410,631 to 411,116
_00411
MPMX19_00412: MPMX19_00412 - Protein translocase subunit SecY, at 411,240 to 412,580
_00412
MPMX19_00413: MPMX19_00413 - Adenylate kinase, at 412,580 to 413,227
_00413
MPMX19_00414: MPMX19_00414 - Pyruvate dehydrogenase complex repressor, at 413,321 to 414,094
_00414
MPMX19_00415: MPMX19_00415 - hypothetical protein, at 414,258 to 415,175
_00415
Group
Condition
MPMX19
_00411
MPMX19
_00412
MPMX19
_00413
MPMX19
_00414
MPMX19
_00415
mgl
MGL
N.D.
N.D.
N.D.
-0.7
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-0.6
-0.0
nf
NF
N.D.
N.D.
N.D.
-0.7
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-0.6
+0.0
nln
NLN
N.D.
N.D.
N.D.
-0.5
+0.1
mgl
MGL
N.D.
N.D.
N.D.
-0.4
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.4
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
+0.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.5
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
+0.6
-0.1
nln
NLN
N.D.
N.D.
N.D.
+0.6
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.5
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.6
+0.0
nf
NF
N.D.
N.D.
N.D.
+0.5
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.7
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.6
+0.0
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
+0.6
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.7
+0.0
mgl
MGL
N.D.
N.D.
N.D.
+0.8
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
+0.7
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.5
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.7
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.7
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.7
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.7
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.9
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.7
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
+0.9
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+1.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+1.0
+0.2
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