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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00360 and MPMX19_00361 are separated by 31 nucleotides
MPMX19_00361 and MPMX19_00362 overlap by 4 nucleotides
MPMX19_00362 and MPMX19_00363 overlap by 4 nucleotides
MPMX19_00363 and MPMX19_00364 are separated by 31 nucleotides
MPMX19_00360: MPMX19_00360 - hypothetical protein, at 368,219 to 369,268
_00360
MPMX19_00361: MPMX19_00361 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 369,300 to 370,013
_00361
MPMX19_00362: MPMX19_00362 - Lipopolysaccharide export system ATP-binding protein LptB, at 370,010 to 370,780
_00362
MPMX19_00363: MPMX19_00363 - hypothetical protein, at 370,777 to 372,624
_00363
MPMX19_00364: MPMX19_00364 - Aliphatic amidase expression-regulating protein, at 372,656 to 373,939
_00364
Group
Condition
MPMX19
_00360
MPMX19
_00361
MPMX19
_00362
MPMX19
_00363
MPMX19
_00364
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-1.3
-1.7
+0.1
+0.0
nf_with_fulln
NF_with_fullN
+0.1
-0.3
-1.1
-0.0
-0.0
nf_with_fulln
NF_with_fullN
+0.0
-0.9
-0.2
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.4
-0.4
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.0
-0.7
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.5
-0.4
+0.0
+0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.3
-0.8
-0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.0
-0.5
-0.0
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
-0.4
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.0
-0.5
-0.1
-0.0
mgl
MGL
+0.2
-0.2
-0.6
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.5
-0.0
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.7
+0.6
-0.1
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.3
+0.3
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.7
+0.6
+0.1
-0.0
nln
NLN
+0.2
-0.3
+0.4
+0.0
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.2
+0.3
+0.1
-0.0
nf
NF
+0.1
-0.2
+0.4
+0.0
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
+0.4
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.2
+0.1
-0.1
mgl
MGL
-0.0
-0.3
+0.9
+0.0
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.3
+0.6
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.7
-0.0
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.1
+0.6
+0.1
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.3
+0.3
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.5
-0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.6
+0.1
-0.0
mgl
MGL
+0.3
+0.2
+0.1
+0.1
+0.2
mgl
MGL
+0.1
+0.3
+0.3
+0.2
+0.1
mgl
MGL
+0.2
+0.3
+0.3
+0.1
+0.0
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