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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00327 and MPMX19_00328 are separated by 8 nucleotides
MPMX19_00328 and MPMX19_00329 are separated by 15 nucleotides
MPMX19_00329 and MPMX19_00330 overlap by 35 nucleotides
MPMX19_00330 and MPMX19_00331 are separated by 105 nucleotides
MPMX19_00327: MPMX19_00327 - 50S ribosomal protein L34, at 330,841 to 330,975
_00327
MPMX19_00328: MPMX19_00328 - Ribonuclease P protein component, at 330,984 to 331,370
_00328
MPMX19_00329: MPMX19_00329 - Putative membrane protein insertion efficiency factor, at 331,386 to 331,715
_00329
MPMX19_00330: MPMX19_00330 - Membrane protein insertase YidC, at 331,681 to 333,498
_00330
MPMX19_00331: MPMX19_00331 - GTP-binding protein EngB, at 333,604 to 334,287
_00331
Group
Condition
MPMX19
_00327
MPMX19
_00328
MPMX19
_00329
MPMX19
_00330
MPMX19
_00331
mgl
MGL
N.D.
N.D.
-1.7
N.D.
N.D.
mgl
MGL
N.D.
N.D.
-1.5
N.D.
N.D.
mgl
MGL
N.D.
N.D.
-1.1
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-1.0
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.8
N.D.
N.D.
mgl
MGL
N.D.
N.D.
-0.8
N.D.
N.D.
mgl
MGL
N.D.
N.D.
-0.8
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.7
N.D.
N.D.
nln
NLN
N.D.
N.D.
-0.7
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.7
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.7
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.6
N.D.
N.D.
nf
NF
N.D.
N.D.
-0.6
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.6
N.D.
N.D.
nf
NF
N.D.
N.D.
-0.6
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.6
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.6
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.6
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.5
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.5
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.5
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.5
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.5
N.D.
N.D.
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