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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00313 and MPMX19_00314 are separated by 22 nucleotides
MPMX19_00314 and MPMX19_00315 are separated by 138 nucleotides
MPMX19_00315 and MPMX19_00316 are separated by 122 nucleotides
MPMX19_00316 and MPMX19_00317 are separated by 235 nucleotides
MPMX19_00313: MPMX19_00313 - hypothetical protein, at 316,993 to 317,562
_00313
MPMX19_00314: MPMX19_00314 - Succinyl-diaminopimelate desuccinylase, at 317,585 to 318,733
_00314
MPMX19_00315: MPMX19_00315 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 318,872 to 319,714
_00315
MPMX19_00316: MPMX19_00316 - Phosphoglycolate phosphatase, at 319,837 to 320,592
_00316
MPMX19_00317: MPMX19_00317 - hypothetical protein, at 320,828 to 322,555
_00317
Group
Condition
MPMX19
_00313
MPMX19
_00314
MPMX19
_00315
MPMX19
_00316
MPMX19
_00317
mgl
MGL
-0.2
N.D.
N.D.
-0.1
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
N.D.
N.D.
-0.0
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
N.D.
N.D.
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
N.D.
N.D.
-0.0
-0.4
mgl
MGL
+0.1
N.D.
N.D.
-0.2
-0.1
nf_with_fulln
NF_with_fullN
+0.0
N.D.
N.D.
+0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
N.D.
-0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
N.D.
-0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.2
N.D.
N.D.
-0.0
-0.2
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
N.D.
-0.0
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
N.D.
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
N.D.
N.D.
+0.0
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
N.D.
-0.0
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.1
N.D.
N.D.
+0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
N.D.
+0.0
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
+0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
N.D.
N.D.
-0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
+0.0
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
N.D.
N.D.
-0.1
+0.2
nln
NLN
+0.1
N.D.
N.D.
-0.1
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
-0.0
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
N.D.
N.D.
+0.1
+0.3
nln
NLN
+0.1
N.D.
N.D.
+0.1
+0.1
nln
NLN
+0.0
N.D.
N.D.
+0.1
+0.2
mgl
MGL
+0.2
N.D.
N.D.
-0.0
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
N.D.
+0.0
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
N.D.
N.D.
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
N.D.
N.D.
+0.1
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
N.D.
+0.1
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
N.D.
N.D.
-0.0
+0.5
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