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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00267 and MPMX19_00268 are separated by 251 nucleotides
MPMX19_00268 and MPMX19_00269 are separated by 113 nucleotides
MPMX19_00269 and MPMX19_00270 are separated by 134 nucleotides
MPMX19_00270 and MPMX19_00271 are separated by 116 nucleotides
MPMX19_00267: MPMX19_00267 - hypothetical protein, at 268,782 to 268,967
_00267
MPMX19_00268: MPMX19_00268 - Transcriptional regulatory protein OmpR, at 269,219 to 269,932
_00268
MPMX19_00269: MPMX19_00269 - 2-hydroxychromene-2-carboxylate isomerase, at 270,046 to 270,660
_00269
MPMX19_00270: MPMX19_00270 - hypothetical protein, at 270,795 to 271,934
_00270
MPMX19_00271: MPMX19_00271 - hypothetical protein, at 272,051 to 272,479
_00271
Group
Condition
MPMX19
_00267
MPMX19
_00268
MPMX19
_00269
MPMX19
_00270
MPMX19
_00271
mgl
MGL
+0.4
-2.2
-0.1
-0.1
+0.2
mgl
MGL
+0.3
-1.6
+0.1
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-1.2
-0.1
+0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.2
-1.2
+0.2
-0.1
-0.2
nf_with_fulln
NF_with_fullN
-0.0
-0.4
-0.2
-0.2
-0.2
mgl
MGL
+0.1
-1.2
+0.0
+0.0
-0.0
nf_with_fulln
NF_with_fullN
+0.0
-0.9
+0.1
-0.3
+0.0
nln
NLN
+0.0
-0.9
-0.0
-0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-1.1
-0.0
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.6
-0.0
-0.2
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.9
+0.1
+0.0
-0.1
nln
NLN
+0.1
-0.7
+0.1
-0.1
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.7
-0.0
-0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.2
-0.1
-0.2
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.8
+0.1
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.6
+0.0
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.5
-0.0
+0.0
-0.1
nln
NLN
+0.3
+0.1
-0.2
-0.1
-0.1
mgl
MGL
+0.4
-0.3
-0.1
+0.0
+0.1
nf
NF
+0.2
+0.3
-0.0
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.7
-0.1
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
-0.3
+0.1
+0.0
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.5
-0.2
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
+0.3
-0.1
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.6
+0.1
-0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.7
-0.2
+0.1
+0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.4
+0.0
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.9
-0.4
+0.2
+0.1
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.8
+0.1
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
+0.5
+0.7
-0.0
-0.2
+0.1
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