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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00234 and MPMX19_00235 are separated by 36 nucleotides
MPMX19_00235 and MPMX19_00236 are separated by 200 nucleotides
MPMX19_00236 and MPMX19_00237 are separated by 109 nucleotides
MPMX19_00237 and MPMX19_00238 are separated by 167 nucleotides
MPMX19_00234: MPMX19_00234 - hypothetical protein, at 238,620 to 239,246
_00234
MPMX19_00235: MPMX19_00235 - hypothetical protein, at 239,283 to 239,576
_00235
MPMX19_00236: MPMX19_00236 - HTH-type transcriptional regulator IscR, at 239,777 to 240,232
_00236
MPMX19_00237: MPMX19_00237 - Cysteine synthase, at 240,342 to 241,301
_00237
MPMX19_00238: MPMX19_00238 - hypothetical protein, at 241,469 to 242,260
_00238
Group
Condition
MPMX19
_00234
MPMX19
_00235
MPMX19
_00236
MPMX19
_00237
MPMX19
_00238
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.6
-0.9
-1.4
+0.2
nl-ccm_agar
NL-CCM_agar
-1.1
-0.0
-1.0
-0.6
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.9
+0.0
-1.1
-1.0
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
-0.3
-1.4
-0.6
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.9
-0.1
-0.7
-0.6
-0.2
nf
NF
-0.7
-0.2
-0.8
-0.7
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.7
+0.1
-1.2
-0.6
+0.1
mgl
MGL
-1.7
+0.4
-0.2
-0.9
+0.2
mgl
MGL
+0.1
-0.2
-1.3
-0.7
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.1
-1.1
-1.1
+0.1
nl-ccm_agar
NL-CCM_agar
-0.6
-0.2
-0.5
-0.5
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.6
-0.2
-0.9
-0.5
+0.1
mgl
MGL
-0.6
-0.3
-0.4
-0.7
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.4
-1.1
-0.4
+0.0
nln
NLN
-0.7
+0.2
-0.5
-0.5
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.1
-0.1
-0.7
-0.1
+0.1
nl-ccm_agar
NL-CCM_agar
-0.8
+0.2
-1.0
+0.0
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
-0.6
-0.7
-0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
-0.1
-0.6
-0.8
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.2
-1.1
-0.3
+0.2
nf_with_fulln
NF_with_fullN
-0.3
+0.0
+1.5
+0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-1.1
+0.3
+1.9
+0.4
-0.2
nf_with_fulln
NF_with_fullN
-0.1
+0.1
+1.3
+0.6
-0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.1
+1.2
+0.8
-0.1
nf_with_fulln
NF_with_fullN
+0.6
-0.2
+1.3
+0.7
-0.1
nf_with_fulln
NF_with_fullN
+0.5
-0.1
+1.4
+0.8
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.2
+2.6
+0.6
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
-0.1
+2.1
+0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.7
+2.1
+0.6
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.1
+1.7
+0.9
-0.2
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