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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00229 and MPMX19_00230 are separated by 4 nucleotides
MPMX19_00230 and MPMX19_00231 overlap by 4 nucleotides
MPMX19_00231 and MPMX19_00232 are separated by 120 nucleotides
MPMX19_00232 and MPMX19_00233 are separated by 53 nucleotides
MPMX19_00229: MPMX19_00229 - Oligopeptide transport ATP-binding protein OppD, at 232,501 to 233,361
_00229
MPMX19_00230: MPMX19_00230 - putative D,D-dipeptide transport system permease protein DdpC, at 233,366 to 234,286
_00230
MPMX19_00231: MPMX19_00231 - Dipeptide transport system permease protein DppB, at 234,283 to 235,293
_00231
MPMX19_00232: MPMX19_00232 - Thioredoxin reductase, at 235,414 to 236,418
_00232
MPMX19_00233: MPMX19_00233 - hypothetical protein, at 236,472 to 238,412
_00233
Group
Condition
MPMX19
_00229
MPMX19
_00230
MPMX19
_00231
MPMX19
_00232
MPMX19
_00233
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.5
-0.1
N.D.
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
-0.1
N.D.
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.3
+0.0
N.D.
-0.9
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.2
-0.2
N.D.
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.0
+0.0
N.D.
-0.9
mgl
MGL
+0.2
-0.4
+0.0
N.D.
-0.2
mgl
MGL
+0.2
-0.4
+0.0
N.D.
-0.3
nln
NLN
+0.1
-0.1
-0.0
N.D.
-0.3
nln
NLN
+0.1
+0.0
-0.0
N.D.
-0.4
mgl
MGL
-0.1
+0.2
+0.0
N.D.
-0.3
nln
NLN
-0.0
+0.1
-0.0
N.D.
-0.3
nln
NLN
+0.1
+0.1
-0.0
N.D.
-0.3
mgl
MGL
+0.1
+0.1
-0.0
N.D.
-0.4
nln
NLN
+0.2
+0.0
+0.0
N.D.
-0.3
nf_with_fulln
NF_with_fullN
+0.1
+0.1
-0.0
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.2
+0.1
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.1
+0.0
-0.1
N.D.
+0.4
nf
NF
+0.2
+0.1
+0.1
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.2
-0.0
N.D.
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.2
+0.1
N.D.
-0.1
mgl
MGL
+0.5
+0.0
-0.0
N.D.
-0.1
nf
NF
+0.2
+0.1
+0.2
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.1
+0.1
N.D.
+0.1
mgl
MGL
+0.4
-0.1
+0.1
N.D.
+0.1
nln
NLN
+0.2
+0.2
+0.1
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
+0.0
+0.1
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.1
N.D.
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.1
+0.2
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.0
+0.2
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.2
+0.1
N.D.
+0.1
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