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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00200 and MPMX19_00201 are separated by 398 nucleotides
MPMX19_00201 and MPMX19_00202 are separated by 77 nucleotides
MPMX19_00202 and MPMX19_00203 are separated by 104 nucleotides
MPMX19_00203 and MPMX19_00204 are separated by 126 nucleotides
MPMX19_00200: MPMX19_00200 - hypothetical protein, at 203,279 to 203,842
_00200
MPMX19_00201: MPMX19_00201 - hypothetical protein, at 204,241 to 204,408
_00201
MPMX19_00202: MPMX19_00202 - Glutamate--tRNA ligase, at 204,486 to 205,343
_00202
MPMX19_00203: MPMX19_00203 - Ribosomal RNA large subunit methyltransferase I, at 205,448 to 206,659
_00203
MPMX19_00204: MPMX19_00204 - hypothetical protein, at 206,786 to 207,130
_00204
Group
Condition
MPMX19
_00200
MPMX19
_00201
MPMX19
_00202
MPMX19
_00203
MPMX19
_00204
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.2
+0.0
-0.1
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
-0.2
+0.1
+0.0
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.2
-0.0
-0.1
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.4
-0.0
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.5
+0.0
+0.0
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.0
-0.1
+0.1
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.6
+0.0
-0.0
+0.1
nf
NF
-0.1
-0.7
+0.1
+0.0
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.2
-0.0
+0.2
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
-0.2
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.1
-0.0
-0.7
-0.0
+0.1
+0.4
nf_with_fulln
NF_with_fullN
-0.4
-0.1
-0.1
+0.1
+0.4
mgl
MGL
-0.1
-0.7
+0.2
+0.2
+0.3
mgl
MGL
+0.4
-0.4
-0.4
+0.2
+0.1
nf_with_fulln
NF_with_fullN
-0.4
-0.2
+0.1
-0.0
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.4
+0.3
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.1
-0.0
+0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.3
+0.0
+0.0
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.1
-0.1
+0.1
+0.5
nl-ccm_agar
NL-CCM_agar
-0.1
-0.2
+0.1
+0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.1
+0.0
-0.0
+0.4
nf_with_fulln
NF_with_fullN
-0.2
+0.3
+0.1
-0.0
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.0
+0.2
+0.1
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
+0.2
+0.1
+0.1
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.2
-0.1
-0.1
+0.4
nln
NLN
-0.1
+0.2
+0.1
-0.0
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.0
+0.3
-0.1
+0.1
mgl
MGL
+0.2
+0.3
+0.2
+0.2
-0.1
mgl
MGL
-0.0
+0.2
+0.2
-0.0
+0.6
mgl
MGL
-0.1
+0.1
+0.2
+0.1
+0.8
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