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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00117 and MPMX19_00118 are separated by 371 nucleotides
MPMX19_00118 and MPMX19_00119 are separated by 129 nucleotides
MPMX19_00119 and MPMX19_00120 are separated by 38 nucleotides
MPMX19_00120 and MPMX19_00121 overlap by 4 nucleotides
MPMX19_00117: MPMX19_00117 - Protein translocase subunit SecA, at 127,534 to 130,269
_00117
MPMX19_00118: MPMX19_00118 - putative parvulin-type peptidyl-prolyl cis-trans isomerase, at 130,641 to 131,699
_00118
MPMX19_00119: MPMX19_00119 - Arginine biosynthesis bifunctional protein ArgJ, at 131,829 to 133,067
_00119
MPMX19_00120: MPMX19_00120 - hypothetical protein, at 133,106 to 133,690
_00120
MPMX19_00121: MPMX19_00121 - CTP pyrophosphohydrolase, at 133,687 to 134,130
_00121
Group
Condition
MPMX19
_00117
MPMX19
_00118
MPMX19
_00119
MPMX19
_00120
MPMX19
_00121
mgl
MGL
N.D.
-0.6
N.D.
-1.1
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.7
N.D.
-0.3
-0.3
mgl
MGL
N.D.
-0.2
N.D.
-0.6
-0.4
nf
NF
N.D.
-0.7
N.D.
-0.3
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.8
N.D.
-0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.2
N.D.
-0.6
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.3
N.D.
-0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
N.D.
-0.4
+0.0
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.6
N.D.
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.5
N.D.
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.4
N.D.
-0.3
-0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.3
N.D.
-0.3
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.6
N.D.
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.5
N.D.
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
N.D.
-0.3
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.3
N.D.
-0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
N.D.
-0.5
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.5
N.D.
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.3
N.D.
-0.2
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.4
N.D.
-0.2
-0.1
nln
NLN
N.D.
-0.4
N.D.
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.3
N.D.
-0.5
+0.2
nf_with_fulln
NF_with_fullN
N.D.
-0.1
N.D.
-0.5
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.4
N.D.
+0.2
-0.4
nl-ccm_agar
NL-CCM_agar
N.D.
-0.4
N.D.
+0.1
-0.2
mgl
MGL
N.D.
-0.3
N.D.
+0.2
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
N.D.
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
N.D.
+0.2
+0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.2
N.D.
+0.4
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.3
N.D.
-0.2
-0.1
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