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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00097 and MPMX19_00098 are separated by 111 nucleotides
MPMX19_00098 and MPMX19_00099 are separated by 48 nucleotides
MPMX19_00099 and MPMX19_00100 are separated by 149 nucleotides
MPMX19_00100 and MPMX19_00101 are separated by 173 nucleotides
MPMX19_00097: MPMX19_00097 - hypothetical protein, at 105,013 to 105,225
_00097
MPMX19_00098: MPMX19_00098 - hypothetical protein, at 105,337 to 106,527
_00098
MPMX19_00099: MPMX19_00099 - Ribonuclease D, at 106,576 to 106,992
_00099
MPMX19_00100: MPMX19_00100 - hypothetical protein, at 107,142 to 107,387
_00100
MPMX19_00101: MPMX19_00101 - Formyl-CoA:oxalate CoA-transferase, at 107,561 to 108,811
_00101
Group
Condition
MPMX19
_00097
MPMX19
_00098
MPMX19
_00099
MPMX19
_00100
MPMX19
_00101
mgl
MGL
-0.1
-0.1
N.D.
-0.7
+0.2
nl-ccm_agar
NL-CCM_agar
-0.1
+0.1
N.D.
-0.6
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
+0.1
N.D.
-0.5
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.1
N.D.
-0.3
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.0
N.D.
-0.7
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.1
N.D.
-0.6
+0.2
nl-ccm_agar
NL-CCM_agar
+0.1
+0.0
N.D.
-0.5
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.1
N.D.
-0.3
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.2
N.D.
-0.5
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
N.D.
-0.3
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.0
N.D.
-0.4
+0.2
nf_with_fulln
NF_with_fullN
+0.4
+0.1
N.D.
-0.5
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.1
N.D.
+0.4
-0.1
mgl
MGL
-0.3
+0.1
N.D.
+0.4
+0.0
nln
NLN
-0.2
-0.0
N.D.
+0.3
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.1
N.D.
+0.2
+0.2
mgl
MGL
+0.2
-0.1
N.D.
-0.0
+0.2
mgl
MGL
-0.1
-0.1
N.D.
+0.5
-0.0
nln
NLN
+0.3
-0.1
N.D.
-0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.1
N.D.
+0.2
-0.1
nln
NLN
-0.1
+0.0
N.D.
+0.4
+0.1
mgl
MGL
+0.1
-0.2
N.D.
+0.2
+0.3
nf_with_fulln
NF_with_fullN
+0.1
+0.2
N.D.
+0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.0
+0.2
N.D.
+0.4
+0.0
nf_with_fulln
NF_with_fullN
+0.3
+0.1
N.D.
+0.2
+0.2
nln
NLN
+0.2
+0.0
N.D.
+0.5
+0.1
nf_with_fulln
NF_with_fullN
+0.0
+0.2
N.D.
+0.4
+0.2
nln
NLN
+0.1
-0.0
N.D.
+0.8
+0.2
nf_with_fulln
NF_with_fullN
+0.2
+0.3
N.D.
+0.6
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
-0.1
N.D.
+0.6
+0.4
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