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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00040 and MPMX19_00041 are separated by 57 nucleotides
MPMX19_00041 and MPMX19_00042 are separated by 40 nucleotides
MPMX19_00042 and MPMX19_00043 are separated by 197 nucleotides
MPMX19_00043 and MPMX19_00044 are separated by 218 nucleotides
MPMX19_00040: MPMX19_00040 - Exodeoxyribonuclease III, at 43,006 to 43,800
_00040
MPMX19_00041: MPMX19_00041 - Putative phosphoserine phosphatase 2, at 43,858 to 44,439
_00041
MPMX19_00042: MPMX19_00042 - hypothetical protein, at 44,480 to 45,292
_00042
MPMX19_00043: MPMX19_00043 - Ribonuclease BN, at 45,490 to 46,410
_00043
MPMX19_00044: MPMX19_00044 - hypothetical protein, at 46,629 to 47,423
_00044
Group
Condition
MPMX19
_00040
MPMX19
_00041
MPMX19
_00042
MPMX19
_00043
MPMX19
_00044
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.0
-0.2
-0.1
-0.6
mgl
MGL
-0.1
-0.4
-0.3
+0.4
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
-0.3
+0.5
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.0
-0.0
+0.2
-0.6
mgl
MGL
-0.2
+0.2
+0.1
+0.0
-0.7
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
+0.2
+0.2
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.2
+0.1
-0.4
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.0
-0.0
+0.3
-0.6
mgl
MGL
-0.2
-0.2
-0.4
+0.1
+0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.3
-0.2
-0.1
+0.7
mgl
MGL
-0.2
-0.4
+0.1
+0.3
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.5
+0.2
+0.1
+0.6
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.2
-0.1
+0.2
+0.4
mgl
MGL
+0.1
+0.0
+0.3
+0.4
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
+0.0
+0.4
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.2
-0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
+0.2
+0.3
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.3
+0.2
+0.2
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.1
+0.2
+0.1
+0.5
nf_with_fulln
NF_with_fullN
-0.1
+0.4
-0.0
+0.5
-0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.4
+0.0
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.2
+0.0
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.2
+0.3
+0.3
nf_with_fulln
NF_with_fullN
-0.1
+0.6
+0.1
+0.3
+0.0
nln
NLN
-0.0
+0.3
+0.3
+0.2
+0.2
nln
NLN
+0.1
+0.2
+0.2
+0.2
+0.4
nf_with_fulln
NF_with_fullN
-0.1
+0.1
+0.4
+0.5
+0.4
mgl
MGL
+0.1
+0.4
+0.1
+0.2
+0.5
nf_with_fulln
NF_with_fullN
-0.0
+0.4
+0.1
+0.4
+0.5
nf_with_fulln
NF_with_fullN
+0.1
+0.3
-0.0
+0.5
+0.5
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