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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00014 and MPMX19_00015 overlap by 4 nucleotides
MPMX19_00015 and MPMX19_00016 are separated by 211 nucleotides
MPMX19_00016 and MPMX19_00017 are separated by 179 nucleotides
MPMX19_00017 and MPMX19_00018 are separated by 6 nucleotides
MPMX19_00014: MPMX19_00014 - hypothetical protein, at 17,194 to 19,449
_00014
MPMX19_00015: MPMX19_00015 - hypothetical protein, at 19,446 to 20,219
_00015
MPMX19_00016: MPMX19_00016 - Adenosine deaminase, at 20,431 to 22,002
_00016
MPMX19_00017: MPMX19_00017 - Beta-barrel assembly-enhancing protease, at 22,182 to 23,840
_00017
MPMX19_00018: MPMX19_00018 - hypothetical protein, at 23,847 to 25,160
_00018
Group
Condition
MPMX19
_00014
MPMX19
_00015
MPMX19
_00016
MPMX19
_00017
MPMX19
_00018
mgl
MGL
+0.1
-1.1
-0.1
-0.0
+0.1
mgl
MGL
-0.1
-0.6
+0.0
+0.0
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-1.1
+0.0
+0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-1.1
+0.0
-0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-1.1
+0.4
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.9
+0.1
+0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.9
+0.4
-0.2
+0.1
nf
NF
+0.0
-0.9
+0.0
+0.2
+0.2
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.5
+0.0
+0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.9
+0.1
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.6
+0.1
+0.0
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.5
+0.1
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.4
+0.1
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.7
-0.0
+0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.6
+0.0
+0.1
+0.2
nln
NLN
+0.2
-0.5
+0.1
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
+0.1
+0.1
+0.2
mgl
MGL
+0.2
-0.5
+0.3
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.3
+0.4
-0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.4
+0.1
+0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
+0.6
-0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.3
-0.7
+0.6
+0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.0
+0.5
+0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.3
+0.3
+0.6
-0.1
-0.0
mgl
MGL
-0.1
+0.8
+0.0
-0.1
+0.3
nln
NLN
+0.2
+0.6
+0.2
+0.2
+0.1
nln
NLN
+0.2
+0.4
+0.2
+0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.2
+0.4
+0.6
+0.0
+0.2
nf_with_fulln
NF_with_fullN
+0.3
+0.3
+0.6
+0.0
+0.3
nf_with_fulln
NF_with_fullN
+0.4
+0.7
+0.6
+0.0
+0.2
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