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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00008 and MPMX19_00009 are separated by 140 nucleotides
MPMX19_00009 and MPMX19_00010 are separated by 242 nucleotides
MPMX19_00010 and MPMX19_00011 overlap by 4 nucleotides
MPMX19_00011 and MPMX19_00012 are separated by 170 nucleotides
MPMX19_00008: MPMX19_00008 - hypothetical protein, at 9,668 to 9,802
_00008
MPMX19_00009: MPMX19_00009 - hypothetical protein, at 9,943 to 10,536
_00009
MPMX19_00010: MPMX19_00010 - Transcriptional regulatory protein OmpR, at 10,779 to 11,522
_00010
MPMX19_00011: MPMX19_00011 - Adaptive-response sensory-kinase SasA, at 11,519 to 13,003
_00011
MPMX19_00012: MPMX19_00012 - Biosynthetic peptidoglycan transglycosylase, at 13,174 to 15,621
_00012
Group
Condition
MPMX19
_00008
MPMX19
_00009
MPMX19
_00010
MPMX19
_00011
MPMX19
_00012
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.7
+0.1
-0.2
-0.3
-0.0
mgl
MGL
-0.9
-0.0
+0.5
-0.3
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
+0.1
+0.2
+0.1
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.8
-0.0
+0.5
+0.2
-0.0
mgl
MGL
-0.4
+0.0
+0.4
-0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.0
+0.4
+0.1
+0.0
nf
NF
-0.5
+0.1
+0.4
+0.2
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.2
-0.3
+0.0
-0.1
mgl
MGL
-0.3
-0.0
+0.7
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.2
+0.3
+0.2
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.2
+0.5
+0.0
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
+0.1
+0.5
-0.3
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
-0.0
+0.1
-0.3
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.3
+0.1
+0.4
-0.1
nln
NLN
+0.6
+0.1
-0.1
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
+0.6
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.2
+0.4
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.0
+0.3
+0.3
+0.1
nln
NLN
+0.4
+0.1
+0.2
+0.3
+0.1
nln
NLN
+0.5
+0.2
+0.2
+0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.4
-0.1
+0.3
+0.4
+0.2
nln
NLN
+0.5
+0.2
+0.4
+0.3
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
+0.2
+0.5
+0.3
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
+0.6
+0.8
+0.1
nln
NLN
+0.9
-0.0
+0.2
+0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.7
+0.7
+0.0
nf_with_fulln
NF_with_fullN
+0.9
-0.2
+0.3
+0.7
+0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.9
+0.6
+0.2
nf_with_fulln
NF_with_fullN
+0.5
-0.1
+0.7
+0.7
+0.3
nf_with_fulln
NF_with_fullN
+0.7
+0.1
+0.5
+0.7
+0.2
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