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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00005 and MPMX19_00006 are separated by 114 nucleotides
MPMX19_00006 and MPMX19_00007 are separated by 46 nucleotides
MPMX19_00007 and MPMX19_00008 are separated by 98 nucleotides
MPMX19_00008 and MPMX19_00009 are separated by 140 nucleotides
MPMX19_00005: MPMX19_00005 - hypothetical protein, at 5,363 to 6,445
_00005
MPMX19_00006: MPMX19_00006 - Heat shock protein 15, at 6,560 to 6,997
_00006
MPMX19_00007: MPMX19_00007 - hypothetical protein, at 7,044 to 9,569
_00007
MPMX19_00008: MPMX19_00008 - hypothetical protein, at 9,668 to 9,802
_00008
MPMX19_00009: MPMX19_00009 - hypothetical protein, at 9,943 to 10,536
_00009
Group
Condition
MPMX19
_00005
MPMX19
_00006
MPMX19
_00007
MPMX19
_00008
MPMX19
_00009
mgl
MGL
-2.2
+0.1
+0.1
-0.4
+0.1
mgl
MGL
-1.8
+0.0
-0.0
-0.3
-0.0
nl-ccm_agar
NL-CCM_agar
-1.4
-0.6
+0.0
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.6
-0.1
+0.2
-0.8
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.8
+0.0
+0.0
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.4
-0.0
-0.7
+0.1
mgl
MGL
-1.6
+0.2
+0.3
+0.1
+0.2
mgl
MGL
-0.8
+0.2
-0.0
-0.4
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
-0.5
+0.0
+0.0
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
+0.1
+0.2
-0.6
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.3
+0.2
-0.3
-0.1
mgl
MGL
-0.3
+0.1
+0.3
-0.9
-0.0
nl-ccm_agar
NL-CCM_agar
-1.0
-0.2
+0.1
+0.3
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
-0.4
+0.1
+0.4
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.4
+0.2
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
-0.5
+0.1
+0.3
+0.2
nf_with_fulln
NF_with_fullN
-0.9
+0.3
-0.0
+0.5
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
-0.2
+0.1
+0.3
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.0
-0.2
+0.4
+0.2
nln
NLN
-0.6
+0.4
+0.1
+0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.4
+0.1
+0.4
-0.0
nln
NLN
-0.3
+0.2
+0.2
+0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.3
+0.1
+0.6
-0.0
nln
NLN
+0.5
-0.2
+0.2
+0.3
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.2
-0.2
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.4
-0.3
+0.2
+0.6
+0.1
nln
NLN
+0.5
-0.1
+0.1
+0.5
+0.2
nf_with_fulln
NF_with_fullN
+0.4
+0.1
+0.0
+0.7
+0.1
nln
NLN
+0.5
+0.0
+0.1
+0.9
-0.0
nf_with_fulln
NF_with_fullN
+0.8
+0.1
+0.2
+0.9
-0.2
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