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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00001 and MPMX19_00002 are separated by 127 nucleotides
MPMX19_00002 and MPMX19_00003 are separated by 207 nucleotides
MPMX19_00003 and MPMX19_00004 are separated by 19 nucleotides
MPMX19_00004 and MPMX19_00005 are separated by 245 nucleotides
MPMX19_00001: MPMX19_00001 - Chromosomal replication initiator protein DnaA, at 1 to 1,569
_00001
MPMX19_00002: MPMX19_00002 - Response regulator PleD, at 1,697 to 2,623
_00002
MPMX19_00003: MPMX19_00003 - hypothetical protein, at 2,831 to 4,030
_00003
MPMX19_00004: MPMX19_00004 - Oligosaccharides import ATP-binding protein MsmX, at 4,050 to 5,117
_00004
MPMX19_00005: MPMX19_00005 - hypothetical protein, at 5,363 to 6,445
_00005
Group
Condition
MPMX19
_00001
MPMX19
_00002
MPMX19
_00003
MPMX19
_00004
MPMX19
_00005
mgl
MGL
N.D.
-0.3
+0.0
-0.0
-2.2
mgl
MGL
N.D.
-0.1
+0.2
-0.4
-1.8
mgl
MGL
N.D.
+0.2
-0.1
-0.1
-1.6
nl-ccm_agar
NL-CCM_agar
N.D.
-0.0
+0.0
+0.0
-1.4
mgl
MGL
N.D.
+0.2
-0.0
-0.1
-0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.1
+0.0
-0.1
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.0
-0.2
-0.0
-0.5
mgl
MGL
N.D.
+0.1
-0.0
-0.2
-0.5
nln
NLN
N.D.
-0.0
+0.0
-0.1
-0.6
nl-ccm_agar
NL-CCM_agar
N.D.
+0.2
+0.1
+0.1
-1.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.1
-0.0
+0.0
-0.6
nln
NLN
N.D.
+0.1
+0.2
-0.1
-0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.3
-0.3
-0.1
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.2
-0.2
-0.1
-0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.2
+0.3
+0.3
-0.9
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.3
+0.1
+0.1
-0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.4
+0.0
+0.1
-0.4
nf
NF
N.D.
+0.3
+0.2
-0.0
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
+0.3
+0.1
-0.4
nf_with_fulln
NF_with_fullN
N.D.
+0.1
+0.3
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.1
+0.3
-0.2
+0.7
nf_with_fulln
NF_with_fullN
N.D.
-0.0
+0.2
+0.2
+0.4
nln
NLN
N.D.
+0.2
+0.1
+0.2
+0.5
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.2
+0.3
+0.4
nln
NLN
N.D.
+0.2
-0.0
+0.3
+0.5
nln
NLN
N.D.
+0.2
+0.0
+0.3
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
+0.5
+0.1
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.2
+0.2
+0.4
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
+0.2
+0.2
+0.6
nf_with_fulln
NF_with_fullN
N.D.
+0.1
+0.4
+0.2
+0.8
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