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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_28520 and MCAODC_28525 overlap by 1 nucleotides
MCAODC_28525 and MCAODC_28530 overlap by 4 nucleotides
MCAODC_28530 and alpA overlap by 4 nucleotides
alpA and MCAODC_28550 are separated by 933 nucleotides
MCAODC_28520: MCAODC_28520 - Clp protease ClpB, at 2,460,926 to 2,461,249
_28520
MCAODC_28525: MCAODC_28525 - hypothetical protein, at 2,461,249 to 2,461,470
_28525
MCAODC_28530: MCAODC_28530 - Ash-like/host cell division inhibitor Icd-like protein, at 2,461,467 to 2,462,024
_28530
MCAODC_28545: alpA - AlpA family transcriptional regulator, at 2,462,021 to 2,462,281
alpA
MCAODC_28550: MCAODC_28550 - septation initiation protein, at 2,463,215 to 2,463,967
_28550
Group
Condition
MCAODC
_28520
MCAODC
_28525
MCAODC
_28530
MCAODC
_28545
MCAODC
_28550
alpA
phage
WM_Bas14
-0.9
+0.3
+0.0
N.D.
-0.1
carbon source
L-Arabinose
+0.1
-0.5
-0.0
N.D.
-0.1
phage
Bas09
+0.1
-0.3
-0.1
N.D.
-0.2
carbon source
Casamino-acids
+0.3
-0.5
-0.3
N.D.
-0.0
carbon source
L-Arabinose
-0.1
-0.1
-0.2
N.D.
-0.1
phage
WM_TP9
-0.3
-0.1
+0.1
N.D.
-0.1
phage
WM_TP9
-0.8
+0.4
+0.1
N.D.
-0.0
phage
WM_Bas41
+0.2
-0.1
-0.2
N.D.
-0.2
carbon source
Sodium-DL-Lactate
+0.2
-0.2
-0.2
N.D.
-0.1
no phage control
Control_ECRC101_WM
+0.1
+0.1
-0.2
N.D.
-0.1
phage
Bas14
+0.2
+0.1
+0.0
N.D.
-0.4
carbon source
D-Glucose
+0.0
+0.1
+0.0
N.D.
-0.2
phage
Bas14
-0.0
+0.1
-0.2
N.D.
+0.1
carbon source
Sodium-DL-Lactate
+0.3
-0.3
+0.1
N.D.
-0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.1
N.D.
-0.1
carbon source
D-Glucose
-0.1
+0.1
+0.0
N.D.
+0.1
phage
WM_Bas09
+0.3
+0.0
-0.1
N.D.
-0.2
phage
WM_Bas09
-0.2
+0.1
+0.1
N.D.
+0.1
carbon source
Casamino-acids
+0.3
-0.3
+0.1
N.D.
-0.1
phage
WM_RB68
-0.0
+0.0
+0.1
N.D.
+0.1
phage
EV240
-0.4
+0.1
+0.2
N.D.
+0.3
phage
WM_EV240
-0.0
+0.1
+0.1
N.D.
-0.0
phage
Bas09
+0.1
+0.3
+0.2
N.D.
-0.2
phage
TP9
+0.5
+0.1
-0.1
N.D.
-0.1
phage
EV240
-0.0
+0.2
+0.1
N.D.
+0.0
phage
WM_EV240
+0.2
+0.2
+0.1
N.D.
+0.2
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