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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
frsA and lysR are separated by 245 nucleotides
lysR and MCAODC_28495 are separated by 702 nucleotides
MCAODC_28495 and ydfG are separated by 166 nucleotides
ydfG and lysR are separated by 98 nucleotides
MCAODC_28485: frsA - DUF1100 domain-containing protein, at 2,451,740 to 2,452,798
frsA
MCAODC_28490: lysR - LysR family transcriptional regulator, at 2,453,044 to 2,453,946
lysR
MCAODC_28495: MCAODC_28495 - hypothetical protein, at 2,454,649 to 2,454,927
_28495
MCAODC_28500: ydfG - oxidoreductase, at 2,455,094 to 2,455,816
ydfG
MCAODC_28505: lysR - LysR family transcriptional regulator, at 2,455,915 to 2,456,814
lysR
Group
Condition
MCAODC
_28485
MCAODC
_28490
MCAODC
_28495
MCAODC
_28500
MCAODC
_28505
frsA
lysR
ydfG
lysR
phage
WM_Bas09
+0.0
+0.0
-1.2
-0.1
-0.1
carbon source
L-Arabinose
-0.0
-0.1
-0.3
-0.3
-0.2
phage
Bas09
-0.1
+0.1
-0.3
-0.3
+0.1
phage
WM_EV240
-0.1
-0.0
-0.6
+0.0
+0.1
phage
WM_TP9
-0.0
-0.2
-0.3
+0.1
-0.0
carbon source
D-Glucose
-0.1
-0.3
-0.3
+0.0
+0.2
phage
WM_RB68
+0.1
-0.1
-0.4
-0.1
+0.1
carbon source
Casamino-acids
+0.0
+0.2
-0.5
+0.0
-0.0
phage
WM_Bas14
-0.0
-0.0
-0.3
-0.0
+0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
-0.2
-0.2
+0.1
phage
TP9
-0.2
+0.0
+0.0
-0.2
+0.1
carbon source
Sodium-DL-Lactate
+0.0
+0.1
-0.2
-0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.0
-0.1
+0.2
-0.3
+0.1
phage
Bas09
-0.2
+0.1
-0.2
-0.0
+0.2
phage
WM_EV240
-0.1
+0.1
-0.1
-0.0
-0.0
carbon source
D-Glucose
+0.1
+0.1
-0.1
-0.1
-0.0
phage
EV240
-0.2
+0.2
-0.1
+0.0
+0.0
phage
WM_Bas41
+0.1
-0.0
+0.2
+0.1
-0.3
phage
EV240
-0.1
+0.2
-0.0
-0.1
+0.2
carbon source
L-Arabinose
-0.1
-0.1
+0.4
-0.1
-0.0
phage
WM_Bas09
+0.1
+0.1
+0.0
+0.0
-0.0
no phage control
Control_ECRC101_WM
+0.2
+0.1
-0.2
+0.1
+0.1
phage
WM_TP9
+0.1
-0.1
+0.2
-0.0
+0.1
phage
Bas14
+0.1
+0.3
-0.1
-0.2
+0.2
phage
Bas14
+0.0
+0.1
+0.6
-0.3
-0.1
carbon source
Casamino-acids
-0.1
-0.1
+0.7
-0.1
+0.2
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