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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
paoA and paoB overlap by 4 nucleotides
paoB and paoC overlap by 4 nucleotides
paoC and paoD are separated by 9 nucleotides
paoD and araJ are separated by 178 nucleotides
MCAODC_28460: paoA - aldehyde dehydrogenase iron-sulfur subunit, at 2,445,489 to 2,446,178
paoA
MCAODC_28465: paoB - aldehyde oxidoreductase FAD-binding subunit PaoB, at 2,446,175 to 2,447,131
paoB
MCAODC_28470: paoC - aldehyde oxidoreductase molybdenum-binding subunit PaoC, at 2,447,128 to 2,449,326
paoC
MCAODC_28475: paoD - molybdenum cofactor insertion chaperone PaoD, at 2,449,336 to 2,450,292
paoD
MCAODC_28480: araJ - putative arabinose efflux permease AraJ, MFS family, at 2,450,471 to 2,451,598
araJ
Group
Condition
MCAODC
_28460
MCAODC
_28465
MCAODC
_28470
MCAODC
_28475
MCAODC
_28480
paoA
paoB
paoC
paoD
araJ
carbon source
L-Arabinose
-0.4
-0.1
-0.1
-0.1
-0.2
phage
WM_Bas14
-0.4
+0.1
-0.0
-0.4
-0.1
carbon source
Casamino-acids
+0.0
-0.3
-0.0
-0.4
-0.1
phage
WM_Bas41
-0.3
-0.5
-0.2
+0.2
+0.0
phage
WM_EV240
-0.2
-0.2
-0.2
-0.1
-0.1
phage
WM_EV240
-0.1
-0.1
-0.1
-0.3
-0.1
phage
TP9
-0.2
+0.1
+0.0
-0.7
+0.0
phage
WM_TP9
-0.5
+0.1
-0.0
-0.2
+0.0
carbon source
Sodium-DL-Lactate
-0.2
-0.2
+0.1
-0.1
-0.1
phage
WM_RB68
-0.2
-0.1
-0.1
-0.1
-0.2
carbon source
L-Arabinose
-0.0
-0.1
-0.1
+0.0
-0.2
phage
EV240
-0.1
-0.2
-0.0
-0.1
+0.0
phage
WM_Bas09
-0.2
+0.0
-0.2
-0.1
-0.0
phage
Bas09
-0.2
+0.0
-0.0
-0.3
+0.1
phage
WM_TP9
-0.1
-0.1
-0.0
-0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.0
-0.2
+0.3
-0.2
phage
Bas09
+0.1
+0.1
-0.1
-0.4
+0.1
carbon source
Casamino-acids
+0.1
+0.1
-0.1
-0.1
-0.1
phage
WM_Bas09
-0.1
-0.2
-0.1
+0.1
+0.1
no phage control
Control_ECRC101_WM
-0.1
+0.0
+0.0
+0.2
-0.3
no phage control
Control_ECRC101_WM
-0.1
+0.1
-0.1
+0.2
-0.1
phage
Bas14
+0.1
-0.2
+0.0
+0.3
-0.0
carbon source
D-Glucose
-0.2
+0.1
+0.1
+0.2
+0.0
carbon source
D-Glucose
+0.2
-0.1
-0.2
+0.4
+0.1
phage
EV240
+0.3
-0.2
+0.0
+0.3
+0.0
phage
Bas14
+0.2
+0.2
-0.1
+0.4
-0.1
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