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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
insE and rpmE2-1 are separated by 260 nucleotides
rpmE2-1 and MCAODC_28410 overlap by 1 nucleotides
MCAODC_28410 and MCAODC_28415 are separated by 69 nucleotides
MCAODC_28415 and ykgK,ecpR are separated by 824 nucleotides
MCAODC_28400: insE - Transposase InsE and inactivated derivatives, at 2,434,641 to 2,435,021
insE
MCAODC_28405: rpmE2-1 - type B 50S ribosomal protein L31, at 2,435,282 to 2,435,548
rpmE2-1
MCAODC_28410: MCAODC_28410 - 50S ribosomal protein L36 2, at 2,435,548 to 2,435,688
_28410
MCAODC_28415: MCAODC_28415 - Protein, at 2,435,758 to 2,435,949
_28415
MCAODC_28420: ykgK,ecpR - regulator protein EcpR, at 2,436,774 to 2,437,316
ykgK,ecpR
Group
Condition
MCAODC
_28400
MCAODC
_28405
MCAODC
_28410
MCAODC
_28415
MCAODC
_28420
insE
rpmE2-1
ykgK,ecpR
phage
WM_Bas09
N.D.
-0.3
-0.4
-0.3
-0.3
phage
Bas14
N.D.
-0.3
-0.8
+0.2
-0.5
phage
Bas09
N.D.
-0.1
-0.1
-0.3
-0.4
phage
WM_TP9
N.D.
-0.1
-0.3
-0.1
-0.3
phage
Bas14
N.D.
-0.0
-0.6
+0.1
-0.3
no phage control
Control_ECRC101_WM
N.D.
-0.2
-0.2
-0.2
-0.2
carbon source
L-Arabinose
N.D.
-0.5
-0.2
+0.0
+0.0
phage
TP9
N.D.
+0.1
-0.3
-0.2
-0.3
phage
Bas09
N.D.
-0.3
-0.1
-0.1
-0.0
carbon source
D-Glucose
N.D.
-0.1
-0.3
-0.0
-0.1
carbon source
Sodium-DL-Lactate
N.D.
-0.3
+0.1
-0.2
-0.0
phage
WM_TP9
N.D.
-0.1
-0.1
-0.3
+0.0
phage
WM_Bas41
N.D.
-0.2
-0.1
+0.0
-0.1
carbon source
L-Arabinose
N.D.
-0.1
-0.3
-0.1
+0.1
carbon source
Casamino-acids
N.D.
-0.2
+0.0
-0.1
-0.1
carbon source
Casamino-acids
N.D.
-0.3
+0.2
+0.3
-0.3
carbon source
Sodium-DL-Lactate
N.D.
-0.2
+0.2
+0.0
-0.2
phage
WM_Bas09
N.D.
-0.1
-0.1
+0.0
+0.2
phage
EV240
N.D.
-0.0
+0.1
+0.4
-0.3
phage
WM_Bas14
N.D.
-0.0
-0.2
-0.0
+0.4
phage
WM_EV240
N.D.
+0.0
-0.1
+0.1
+0.1
phage
WM_RB68
N.D.
-0.1
+0.1
-0.0
+0.1
no phage control
Control_ECRC101_WM
N.D.
-0.1
+0.3
+0.1
+0.2
carbon source
D-Glucose
N.D.
+0.1
+0.0
-0.1
+0.6
phage
EV240
N.D.
-0.2
+0.6
+0.2
+0.1
phage
WM_EV240
N.D.
-0.1
-0.0
+0.3
+0.6
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